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pocket_finding
filips edited this page Dec 21, 2017
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http://dogsite.zbh.uni-hamburg.de/ - on line pocket finder
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https://www.ebi.ac.uk/pdbsum -> Cleft analysis
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http://mole.upol.cz/ - rapid and fully automated location and characterization of channels, tunnels and pores
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Druggability: https://www.ebi.ac.uk/chembl/drugebility/structure (np 1UV5)
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The computational prediction of allosteric sites in proteins: http://mdl.shsmu.edu.cn/AST/
- Stand alone: np: http://fpocket.sourceforge.net/
- Other tools - list: http://www.vls3d.com/links/bioinformatics/binding-pockets
Computer Aided Drug Design @ Politechnika Warszawska, Filip Stefaniak