v1.0.0 - stable version with complete docs
The workflow performs all steps of the Mixscape Vignette on all samples in the annotation file according to the parametrization in the config file.
- Calculation of local perturbation signatures
- Mixscape classification of perturbed cells versus cells with no detectable perturbation
- Visualization of Mixscape results
- Analysis of perturbation responses with Linear Discriminant Analysis (LDA)
Full Changelog: https://github.com/epigen/mixscape_seurat/commits/v1.0.0