Add proseg tool v3.1.1 for high-speed cell segmentation#7969

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Biochem-50 wants to merge 8 commits into

galaxyproject:mainfrom

Biochem-50:add-proseg-tool

Commits on May 8, 2026

Add proseg tool v3.1.1 for high-speed cell segmentation
Biochem-50
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Register proseg in .tt_index
Biochem-50
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Register proseg in .tt_index
Biochem-50
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Address all IUC review comments: shed.yml, macros, validators, and profile update
Biochem-50
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Commits on May 11, 2026

Address IUC review: Refactor XML parameters and update YAML description
Biochem-50
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Proseg: Address review, fix syntax, and add test data
Biochem-50
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Final refactor: fix directory output and test assertions
Biochem-50
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Commits on May 12, 2026

Fix test assertions and outputs block to resolve CI lint error
Biochem-50
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