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117 Open 184 Closed
117 Open 184 Closed
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Issues list

Add some comments to force-bias-optical-trap.py
#389 opened Apr 25, 2020 by mrshirts
@jchodera
Once examples are done, regenerate reference output text for them. pymbar 4
#382 opened Mar 28, 2020 by mrshirts
@mrshirts
Check proper verbosity of mbar pymbar 4
#379 opened Mar 28, 2020 by mrshirts
1
@jaimergp @mrshirts
12
better KDE bandwidth choice enhancement
#378 opened Mar 28, 2020 by mrshirts
@mrshirts
1
Review logger output levels in current pymbar4 plan in order to make sure they are appropriate pymbar 4
#366 opened Feb 27, 2020 by mrshirts
@mrshirts
Improve feedback on "Should have \sum_n W_nk = 1" warning pymbar 4
#358 opened Feb 21, 2020 by mrshirts
@mrshirts
3
Deprecate u_kln data structures question
#356 opened Feb 19, 2020 by mrshirts
@andrrizzi @jchodera
@Lnaden @mrshirts @SimonBoothroyd
Move examples to use the u_kn format pymbar 4
#355 opened Feb 19, 2020 by mrshirts
@mrshirts
The fate of computeCovarianceOfSums
#353 opened Feb 19, 2020 by Lnaden
@mrshirts
1
Address memory issues pymbar 4
#341 opened Feb 16, 2020 by mrshirts
@jchodera @mrshirts
8
Accelerate the code, starting with the inner loops pymbar 4
#340 opened Feb 16, 2020 by mrshirts
@jchodera
27
Get rid of old_mbar before release of pymbar4 pymbar 4
#338 opened Feb 16, 2020 by mrshirts
@mrshirts
2
Add formal coverage testing tests
#332 opened Feb 13, 2020 by Lnaden 4.0 release
@Lnaden
1
Improve PMF tests
#331 opened Feb 13, 2020 by mrshirts
@mrshirts
2
Get documentation up to specs and caught up documentation question
#329 opened Feb 13, 2020 by mrshirts
@andrrizzi @jaimergp
@jchodera @Lnaden @mrshirts @SimonBoothroyd @hannahbrucemacdonald
1
Main flow already simplified - what else to do? question
#326 opened Feb 4, 2020 by mrshirts
@andrrizzi @kyleabeauchamp
@jaimergp @jchodera @Lnaden @mrshirts @SimonBoothroyd @hannahbrucemacdonald
3
pymbar error!
#323 opened Jan 26, 2020 by sawstory
Should have \sum_n W_nk = 1
#320 opened Dec 4, 2019 by bergazin
7
Question about free enegry uncertainties
#304 opened Apr 24, 2018 by harlor
4
Should possibly try to trap this ComputeExpectation behavior
#303 opened Mar 19, 2018 by mrshirts
@mrshirts
Options to do bootstrapping question
#297 opened Feb 27, 2018 by mrshirts
@mrshirts
8
pymbar.utils.ParameterError: Warning: Should have \sum_n W_nk = 1
#292 opened Feb 23, 2018 by ThanhGromacs
7
Planning for a sparse representation for the u_nk matrix question
#285 opened Feb 18, 2018 by mrshirts
4
Timeseries can be tricked by a couple bad first inputs
#283 opened Jan 22, 2018 by Lnaden
15
detectEquilibration() fails if first frame is an outlier
#277 opened Nov 15, 2017 by ptmerz
1
ProTip! Adding no:label will show everything without a label.