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The most cited problem is resolving the "Warning: Should have \sum_n W_nk = 1" which occurs when the MBAR solver does not converge, and is virtually always caused by not having sufficient overlap between states (see #320,#292,#323,#317)
I will try to write instructions to help people fix their input to avoid this warning.
One question: should it try to put all the options in the text, or would it be better to have the text of the warning refer to a section of the readthedocs site? I'm leaning towards the latter, since we can include graphs, etc. there.
It's possible there are other bits of information I can extract as well from the state of the system to identify other problems, which I can also try to identify.
The text was updated successfully, but these errors were encountered:
Can we do a bit more computation afterwards before we raise the exception? For example, if we can identify that the data is not self-consistent, this can suggest a units or convergence issue.
The most cited problem is resolving the "Warning: Should have \sum_n W_nk = 1" which occurs when the MBAR solver does not converge, and is virtually always caused by not having sufficient overlap between states (see #320,#292,#323,#317)
I will try to write instructions to help people fix their input to avoid this warning.
One question: should it try to put all the options in the text, or would it be better to have the text of the warning refer to a section of the readthedocs site? I'm leaning towards the latter, since we can include graphs, etc. there.
It's possible there are other bits of information I can extract as well from the state of the system to identify other problems, which I can also try to identify.
The text was updated successfully, but these errors were encountered: