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Issues list

Move activity to input
#249 by mayasheth was merged Feb 22, 2025 Loading…
ABC scores don't sum to 1
#248 by kamalobbad was closed Feb 26, 2025
1
Mitigate EmptyDataError race condition
#247 by kaybrand was merged Jan 31, 2025 Loading…
Added delay+retry capability to mitigate EmptyDataError race condition
#246 by kaybrand was closed Jan 31, 2025 Loading…
3
move hic-straw from pip to conda installation
#245 by mayasheth was merged Jan 17, 2025 Loading…
Update dev envs
#244 by mayasheth was merged Jan 12, 2025 Loading…
Update abcenv.yml
#243 by mayasheth was merged Jan 12, 2025 Loading…
1
enforce upper bound on cryptography package
#242 by mayasheth was merged Dec 7, 2024 Loading…
1
AttributeError: module 'lib' has no attribute 'X509_V_FLAG_NOTIFY_POLICY'
#241 by divyanshusrivastava was closed Dec 7, 2024
1
error running ABC model with averaged Hi-C files
#240 by cmlakhan was closed Nov 28, 2024
1
New pipeline v1.1.2 ABC failed to use the ABC for hg19 on K562 dataset
#237 by nttg8100 was closed Sep 5, 2024
silencer
#236 by tan5251 was closed Jan 15, 2025
1
How to specify more than 2 DHS replication ?
#234 by nttg8100 was closed Sep 3, 2024
1
Where I can get the qnorm file
#233 by nttg8100 was closed Aug 26, 2024
1
Where can i find the Reference files for the mouse Reference genome mm10 duplicate This issue or pull request already exists
#232 by mano2991 was closed Jan 15, 2025
1
qnrom in config.yaml for different cells
#231 by JasonLinjc was closed Jan 15, 2025
1
Quantile normalization
#230 by engreitz was closed Jan 15, 2025
@argschwind
1
Update utils.smk
#229 by mayasheth was merged Jul 8, 2024 Loading…
1
predict.py
#228 by BERICP01 was closed Jan 15, 2025
1
Update README.md
#227 by atancoder was closed Jun 5, 2024 Loading…
Dev
#226 by atancoder was merged Jun 4, 2024 Loading…
Update circleci config.yml
#225 by atancoder was merged Jun 4, 2024 Loading…
utilize amazon link as the encode link leads to a segfault in CircleCI
#224 by atancoder was merged May 29, 2024 Loading…
Difference between EnhancerPredictionsFull_threshold0.02_self_promoter.tsv and EnhancerPredictions_threshold0.02_self_promoter.tsv
#223 by NicoleYY77 was closed Jan 15, 2025
3
Failure to replicate results
#222 by PeterWang0502 was closed May 23, 2024
3
ProTip! Adding no:label will show everything without a label.