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61 Open 78 Closed
61 Open 78 Closed
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Issues list

Update eg_bidsapp.yaml files bug Issues noting problems and PRs fixing those problems.
#229 opened Mar 20, 2025 by singlesp
1
add aslprep example yaml file enhancement New feature or request
#228 opened Mar 20, 2025 by B-Sevchik
Replace --list_sub_file with BIDS-format TSV file breaking-change PRs that change results or interfaces. enhancement New feature or request
#224 opened Mar 20, 2025 by tsalo
babs init did not include quotations around paths with wildcards bug Issues noting problems and PRs fixing those problems.
#222 opened Mar 19, 2025 by tientong98
Update to use reportseff to get job status bug Issues noting problems and PRs fixing those problems. enhancement New feature or request
#221 opened Mar 19, 2025 by tientong98
Missing ${TEMPLATEFLOW_HOME} in singularity run cmd bug Issues noting problems and PRs fixing those problems.
#220 opened Mar 19, 2025 by tientong98
1
@tientong98
Hide babs merge's --trial-run parameter documentation Improvements or additions to documentation
#219 opened Mar 19, 2025 by tsalo
Standardize arguments w.r.t. other BIDS Apps breaking-change PRs that change results or interfaces. enhancement New feature or request
#218 opened Mar 19, 2025 by tsalo
2
Reduce accepted values for --type-session breaking-change PRs that change results or interfaces.
#212 opened Mar 19, 2025 by tsalo
1
2
Document user stories documentation Improvements or additions to documentation
#209 opened Mar 19, 2025 by tsalo
4
test freesurfer bids app with BABS
#208 opened Mar 19, 2025 by yibeichan
3
Issue tracking major complaints about BABS
#206 opened Mar 19, 2025 by mattcieslak
Remove SGE in --type_system enhancement New feature or request
#199 opened Mar 17, 2025 by tientong98
@tientong98
Add a babs-save command. enhancement New feature or request
#193 opened Mar 17, 2025 by smeisler
1
bab-init tries to datalad get a subject from input dataset that's NOT on subject list bug Issues noting problems and PRs fixing those problems.
#177 opened Sep 17, 2024 by audreycluo
2
babs requires all zips in original input dataset to be downloaded before doing babs-init enhancement New feature or request
#176 opened Sep 17, 2024 by audreycluo
Allow babs-init to create the container dataset enhancement New feature or request
#174 opened Jul 2, 2024 by tsalo
Consolidate --where-project and --project-name in babs-init breaking-change PRs that change results or interfaces. enhancement New feature or request
#173 opened Jul 2, 2024 by tsalo
Convert --project-root parameter in CLIs to positional argument breaking-change PRs that change results or interfaces. enhancement New feature or request
#172 opened Jul 2, 2024 by tsalo
[ENH] Add workflow for processing and adding new subjects to BABS results enhancement New feature or request
#171 opened Mar 5, 2024 by mattcieslak
Make e2e testing run on PRs as well as e.g. weekly enhancement New feature or request
#170 opened Mar 5, 2024 by yarikoptic
Add user-configurable environment variable passthrough enhancement New feature or request
#167 opened Jan 8, 2024 by asmacdo
All templated bash scripts should be "robust" and shellcheck-clean bug Issues noting problems and PRs fixing those problems.
#166 opened Jan 4, 2024 by yarikoptic
[DOCS] update paper citation
#163 opened Dec 14, 2023 by zhao-cy
@mattcieslak
Make parsing of output more robust
#160 opened Dec 8, 2023 by yarikoptic
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