Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

A python framework for data mining microbial natural products by integrating genomics and metabolomics data

Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects

The Harmony Python library: a research tool for psychologists to harmonise data and questionnaire items. Open source.

Self-hostable, open-source engine for reproducible data harmonization, dataset building & exploration

A Python toolkit for biomedical data integration

This is the DataHarmonizer spreadsheet web application bundled with pathogen genomics data entry and validation templates

Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

Code and sample data for McGregor et al., 2024

AD & PD cohort variable distributions

Intelligent data steward toolbox using Large Language Model embeddings for automated Data-Harmonization

International Physical Activity Questionnaire (IPAQ) variables

Visualizing demographic evolution using geographically inconsistent census data

This is the source code for the Harmony project REST API

Miscellaneous codes for spatial mapping and raster data manipulation

Proof-of-concept for storing and querying harmonized AMR Genomic Analysis Results in datahike

Miscellaneous codes for harmonizing agricultural output and other agri-related data raster files and shapefiles. Extracts from raster files the grid-cell data by shapefile boundary.