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@statgen

Center for Statistical Genetics

The Center for Statistical Genetics at the University of Michigan School of Public Health

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  1. pheweb pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    Python 176 72

  2. locuszoom locuszoom Public

    A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

    JavaScript 160 30

  3. demuxlet demuxlet Public

    Genetic multiplexing of barcoded single cell RNA-seq

    C++ 125 26

  4. SLURM-examples SLURM-examples Public

    Python 92 28

  5. bamUtil bamUtil Public

    C++ 90 30

  6. Minimac4 Minimac4 Public

    C++ 67 22

Repositories

Showing 10 of 113 repositories
  • ansible-bravo-deploy Public

    Anisble deployment roles and playbook for BRAVO API and UI

    statgen/ansible-bravo-deploy’s past year of commit activity
    Jinja 0 0 1 0 Updated May 9, 2025
  • locuszoom Public

    A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

    statgen/locuszoom’s past year of commit activity
    JavaScript 160 MIT 30 12 4 Updated May 9, 2025
  • localzoom Public

    Make interactive LocusZoom plots from a local GWAS file

    statgen/localzoom’s past year of commit activity
    Vue 8 MIT 5 0 9 Updated May 9, 2025
  • locuszoom-hosted Public

    A web service to upload and share GWAS results with LocusZoom.js

    statgen/locuszoom-hosted’s past year of commit activity
    Python 1 MIT 0 13 (2 issues need help) 11 Updated May 8, 2025
  • zorp Public

    A simple GWAS parser + CLI

    statgen/zorp’s past year of commit activity
    Python 1 MIT 0 2 0 Updated May 7, 2025
  • filefetcher Public
    statgen/filefetcher’s past year of commit activity
    Python 0 MIT 0 0 0 Updated May 6, 2025
  • bravo-infrastructure Public

    Provisioning and deployment of example BRAVO vignette.

    statgen/bravo-infrastructure’s past year of commit activity
    HCL 0 0 1 0 Updated May 2, 2025
  • bravo_api Public

    Server side data processing and retrieval endpoints for BRAVO

    statgen/bravo_api’s past year of commit activity
    Python 1 MIT 2 16 0 Updated May 2, 2025
  • encore Public

    Encore Analysis Server

    statgen/encore’s past year of commit activity
    Python 13 AGPL-3.0 6 0 5 Updated May 1, 2025
  • locuszoom-api Public

    Flask server code for LocusZoom APIs

    statgen/locuszoom-api’s past year of commit activity
    Python 1 3 0 0 Updated Apr 28, 2025
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