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object 'CRsparse_rowSums' not found #8178

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KerryAM-R opened this issue Dec 12, 2023 · 1 comment
Closed

object 'CRsparse_rowSums' not found #8178

KerryAM-R opened this issue Dec 12, 2023 · 1 comment
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bug Something isn't working

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@KerryAM-R
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I cannot seem to use the FindMarker, FindAllMarkers function. No DE were found with my dataset or the pbmc_small

The error I get is
Error in .local(x, na.rm, dims, ...) :
object 'CRsparse_rowSums' not found

> FindAllMarkers(FindMarkers)
Error in UseMethod(generic = "Idents", object = object) : 
  no applicable method for 'Idents' applied to an object of class "function"
> FindAllMarkers(pbmc_small)
Calculating cluster 0
Calculating cluster 1
Calculating cluster 2
Warning: No DE genes identified
Warning: The following tests were not performed: 
Warning: When testing 0 versus all:
	object 'CRsparse_rowSums' not found
Warning: When testing 1 versus all:
	object 'CRsparse_rowSums' not found
Warning: When testing 2 versus all:
	object 'CRsparse_rowSums' not found
data frame with 0 columns and 0 rows
@KerryAM-R KerryAM-R added the bug Something isn't working label Dec 12, 2023
@Gesmira
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Gesmira commented Dec 12, 2023

Hi,
This issue as well as its solution is detailed here: #8089 (comment)

@Gesmira Gesmira closed this as completed Dec 12, 2023
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