Skip to content
@satijalab

satijalab

Pinned Loading

  1. seurat seurat Public

    R toolkit for single cell genomics

    R 2.6k 976

  2. azimuth azimuth Public

    A Shiny web app for mapping datasets using Seurat v4

    HTML 138 41

  3. seurat-wrappers seurat-wrappers Public

    Community-provided extensions to Seurat

    R 349 141

  4. seurat-data seurat-data Public

    Dataset distribution for Seurat

    R 148 46

Repositories

Showing 10 of 25 repositories
  • seurat Public

    R toolkit for single cell genomics

    satijalab/seurat’s past year of commit activity
    R 2,560 976 274 34 Updated Nov 14, 2025
  • seurat-object Public
    satijalab/seurat-object’s past year of commit activity
    R 30 33 45 7 Updated Nov 10, 2025
  • Mixscale Public
    satijalab/Mixscale’s past year of commit activity
    R 21 2 15 0 Updated Oct 10, 2025
  • panhumanpy Public
    satijalab/panhumanpy’s past year of commit activity
    Python 22 0 3 3 Updated Oct 1, 2025
  • rna-fingerprinting Public
    satijalab/rna-fingerprinting’s past year of commit activity
    R 6 0 0 0 Updated Sep 21, 2025
  • rna-fingerprinting-data Public
    satijalab/rna-fingerprinting-data’s past year of commit activity
    R 0 0 0 0 Updated Sep 16, 2025
  • AzimuthAPI Public
    satijalab/AzimuthAPI’s past year of commit activity
    R 3 MIT 1 4 0 Updated Jul 29, 2025
  • azimuth-references Public
    satijalab/azimuth-references’s past year of commit activity
    R 25 11 11 1 Updated May 16, 2025
  • sctransform Public

    R package for modeling single cell UMI expression data using regularized negative binomial regression

    satijalab/sctransform’s past year of commit activity
    R 241 GPL-3.0 37 48 0 Updated May 1, 2025
  • seurat-data Public

    Dataset distribution for Seurat

    satijalab/seurat-data’s past year of commit activity
    R 148 GPL-3.0 46 38 1 Updated Mar 6, 2025
View all repositories