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54 changes: 54 additions & 0 deletions 2024/2024-03-19.md
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tags: Tuesday
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# 2024-03-19

Attending: Will, JM, Tom, Muhanad, Frances, Dom, Khaled, Kyle, Petr, Andreas, Maadhav, Seb, Kevin, Chris, Erin

Start: 2:00 pm UK

## Accepting minutes from [last meeting](https://hackmd.io/team/ome?nav=overview)

## Project Status

(2-3 minutes each)

- IDR (Frances):
- rocky linux 9 deployed on idr-next
- idr0151 in progress on pilot
- NGFF - David opened a PR to add s3 direct access
- Will - initial test looks good (faster)
- ansible role tagged but not released yet (won't redploy again with the release)

- OMERO
- merge-ci updated to Rocky linux 9. NB: System is not reachable between 7-8am (UK) every tuesday
- Andres: reviewing web PRs

- Bio-Formats
- Seb: Bio-Formats 7.3.0 planned for mid April
- JDK 21 support is in
- few external contributions
- Ongoing DICOM work

- NGFF
- Josh: proposed community call about standalone labels. https://forum.image.sc/t/save-a-single-labels-dataset-into-an-ome-zarr/93505/21

- GerBI
-

- Glencoe
- Chris: OMERO.server PRs open for review - feedback appreciated
- Zarr PixelBuffer repo preparing for public open-source
- JM: bioformats2raw Docker repo: would be good to automate update if we keep it

- Community
- proposed Panama trip, 2nd week of June

## AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

## Main Topic

(20-25 minutes plus 15 minutes questions max)
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tags: Tuesday
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# 2024-03-26

Attending: Will, JM, Petr, Frances, Dom, June, Khaled, Seb, Melissa, Tom, Andreas, Kyle, Chris,

Start: 2:00 pm UK

## Accepting minutes from [last meeting](https://hackmd.io/team/ome?nav=overview)

## Project Status

(2-3 minutes each)

- IDR
- idr-next now using Rocky Linux 9. Testing looks good. Will be used for next release
- idr0151 testing on pilot, then will import into idr-next for release, approx 2 weeks.
- Will: applying bfoptions updates for ZarrReader on all ngff data
- NGFF: Khaled: issues with updating ZarrReader.jar on microservices.

- OMERO
- PR in progress for long-running processes on omero-web.
- web meeting on Friday cancelled (day off)
- Seb: Proposal for updating OMERO to remove path/name to original files in Pixels table, fix ordering of Fileset Files. https://github.com/ome/openmicroscopy/issues/6380
- microservices issues caused by this
- also NGFF Fileset updates have to deal with this

- Bio-Formats
- Cancel formats meeting on Monday
- 8th April release planning - review 7.3.0

- NGFF
- ome-zarr-py: couple of external PRs
- upcoming call 3rd April on standalone label images (and collections?)

- GerBI
- Various PRs open: KV-Pair scripts: writing tests now
- Tagsearch PR open: included in merge-ci deployment now

- Glencoe
- Server PRs open and available to review
- Reactivated Windows tests for omero-py
- [Ice wheels for Windows](https://github.com/glencoesoftware/zeroc-ice-py-win-x86_64/releases/tag/20240325) py3.8 -> py3.12. Release blog post in preparation
- Glencoe attending several conferences/meetings over next few weeks, presenting posters etc.

- Community
- OME Community Meeting.
- May 29-31 Dundee
- Several speakers confirmed (large image repos).
- preparing to announce on website forum etc..
- busy time for meetings
- Wellcome BioImaging grant prep and others. Will need IDR stats etc.
-


## AOB

- OME HPC Storage Outage
- April 1 5pm UK - April 5.
- Panama trip going ahead

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

## Main Topic

(20-25 minutes plus 15 minutes questions max)

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