List view

devcontainer: Set <code>moby: false</code> to fix trixie builds

Status: Merged (completed).

nf-core/toolsnumber 3904

#3904 In nf-core/tools;

· by mashehu was closed on Nov 18, 2025

Fix LSP warnings on pipeline template

Status: Merged (completed).

nf-core/toolsnumber 3905

#3905 In nf-core/tools;

· by dialvarezs was closed on Nov 18, 2025

devcontainer: downgrade to debian 12 and revert <code>moby:false</code>

Status: Merged (completed).

nf-core/toolsnumber 3907

#3907 In nf-core/tools;

· by mashehu was closed on Nov 18, 2025

Bump minimum python version to 3.10

Status: Merged (completed).

nf-core/toolsnumber 3816

#3816 In nf-core/tools;

· by mashehu was closed on Oct 13, 2025

Automatically sync the Rocrate and README content during pipelines lint

Status: Merged (completed).

nf-core/toolsnumber 3688

#3688 In nf-core/tools;

· by ningyuxin1999 was closed on Oct 28, 2025

Add <code>topics</code> to the template + update linting

Status: Merged (completed).

nf-core/toolsnumber 3779

#3779 In nf-core/tools;

· by nvnieuwk was closed on Oct 29, 2025

feat: Add Claude Code hooks for automated testing and linting

Status: Closed (abandoned).

nf-core/toolsnumber 3774

#3774 In nf-core/tools;

· by edmundmiller was closed on Oct 24, 2025

Update pipeline creation information page to be more exclusive as to what should use the full nf-core pipeline template

Status: Merged (completed).

nf-core/toolsnumber 3891

#3891 In nf-core/tools;

· by jfy133 was closed on Nov 18, 2025

sync: Keep automated template update PRs open

Status: Merged (completed).

nf-core/toolsnumber 3851

#3851 In nf-core/tools;

· by mashehu was closed on Nov 5, 2025

Download pipelines with authenticated GH API calls

Status: Merged (completed).

nf-core/toolsnumber 3607

#3607 In nf-core/tools;

· by jpfeuffer was closed on Nov 6, 2025

Preserve the value of self.modules_repo across nested calls

Status: Merged (completed).

nf-core/toolsnumber 3881

#3881 In nf-core/tools;

· by muffato was closed on Nov 14, 2025

nf-core linting parsing emit output as path

bugSomething isn't workingSomething isn't working

linting

Status: Closed (completed).

Bug

#3842 In nf-core/tools;

· by dialvarezs was closed on Nov 12, 2025

'modules lint' and 'subworkflow lint' should also ignore files from .gitignore

linting

Status: Closed (completed).

#3529 In nf-core/tools;

· by Gullumluvl was closed on Nov 18, 2025

Add link to release blog post on sync PRs

Status: Closed (completed).

#3812 In nf-core/tools;

· by mirpedrol was closed on Nov 18, 2025

Change devcontainer to install tools at current commit

enhancement

Status: Closed (completed).

#3837 In nf-core/tools;

· by JulianFlesch was closed on Nov 17, 2025

Leave old pipelines sync PRs open

Status: Closed (completed).

#3811 In nf-core/tools;

· by mirpedrol was closed on Nov 18, 2025

Wrong min. python version in bioconda recipe

bugSomething isn't workingSomething isn't working

Status: Closed (completed).

#3843 In nf-core/tools;

· by FriederikeHanssen was closed on Nov 18, 2025