Skip to content

BBsplit unmapped - enhancement #9627

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Open
EladH1 wants to merge 2 commits into
base: master
Choose a base branch
from
Open

BBsplit unmapped - enhancement #9627

EladH1 wants to merge 2 commits into from

Conversation

@EladH1
Copy link

@EladH1 EladH1 commented Jan 8, 2026 •
edited
Loading

PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).

As this is in some cases the first alignment it's beneficial to have also unaligned fastq saved.

  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@EladH1 EladH1 requested a review from pinin4fjords January 8, 2026 10:09
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@pinin4fjords pinin4fjords Awaiting requested review from pinin4fjords

At least 1 approving review is required to merge this pull request.

Assignees

No one assigned

Labels

None yet

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

1 participant

@EladH1