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Pull requests: nf-core/modules

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Pull requests list

Updated shinyngs containers and nftest snaps
#7323 opened Jan 16, 2025 by nschcolnicov Loading…
17 tasks
fix and bump gfastats
#7320 opened Jan 16, 2025 by fellen31 Draft
17 tasks
Update mmseqs modules to v16
#7319 opened Jan 16, 2025 by jasmezz Loading…
2 of 17 tasks
Added 2FAST2Q module
#7318 opened Jan 16, 2025 by afombravo Loading…
Update seqkit to version 2.9.0
#7315 opened Jan 15, 2025 by heuermh Loading…
17 tasks
Update odgi to version 0.9.0 Ready for Review
#7313 opened Jan 15, 2025 by heuermh Loading…
17 tasks
Add CATPACK_PREPARE
#7312 opened Jan 15, 2025 by jfy133 Draft
17 tasks
Update purecn/coverage to nf-test
#7308 opened Jan 15, 2025 by SPPearce Loading…
Bump rundeepvariant and vcfstatsreport Ready for Review
#7301 opened Jan 14, 2025 by fellen31 Loading…
17 tasks
Add new module openms/filefilter
#7299 opened Jan 13, 2025 by jonasscheid Loading…
9 of 17 tasks
Swap transdecoder predict to nf-test Ready for Review
#7296 opened Jan 13, 2025 by SPPearce Loading…
Report warning message when analyzing data with two replicates
#7289 opened Jan 10, 2025 by Xinlei-Gao Loading…
17 tasks
Dynamic sharding WIP Work in progress
#7284 opened Jan 9, 2025 by mashehu Loading…
[DO NOT MERGE] Test dynamic sharding step
#7274 opened Jan 7, 2025 by mashehu Loading…
Baysor module
#7270 opened Jan 7, 2025 by sebgoti Loading…
Add new module decoupler/progeny
#7263 opened Dec 26, 2024 by atrigila Draft
17 tasks
PINTS Updates
#7261 opened Dec 23, 2024 by edmundmiller Loading…
Fix: arriba: rename argument and reorder alphabetically
#7255 opened Dec 20, 2024 by rannick Loading…
7 of 17 tasks
New kma module help wanted Extra attention is needed new module Adding a new module nf-test WIP Work in progress
#7251 opened Dec 19, 2024 by Krannich479 Loading…
11 of 14 tasks
READY FOR REVIEW: Adapt output declarations
#7244 opened Dec 18, 2024 by simoxb Loading…
13 tasks
Add functionality for --unknown-slide in spaceranger/count
#7233 opened Dec 17, 2024 by fasterius Loading…
1 task done
added basicpy nftest
#7228 opened Dec 16, 2024 by kbestak Loading…
10 of 14 tasks
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