Skip to content

Issues: nextstrain/cli

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort

Issues list

Communicate why an upload action was not allowed enhancement New feature or request
#395 opened Aug 29, 2024 by jameshadfield
Update "build directory" terminology in help and docs documentation Improvements or additions to documentation
#371 opened May 29, 2024 by tsibley
Show progress during check-setup enhancement New feature or request
#359 opened Feb 1, 2024 by corneliusroemer
Pass AWS credentials from standard file to Docker enhancement New feature or request
#342 opened Dec 27, 2023 by huddlej
Integrate AWS Batch set up and usage doc with runtime doc documentation Improvements or additions to documentation
#304 opened Aug 17, 2023 by tsibley
Docker runner assumes the Docker Hub (docker.io) registry bug Something isn't working
#279 opened May 9, 2023 by tsibley
[build] --cpus isn't passed to thru when using --exec bug Something isn't working
#272 opened Apr 12, 2023 by corneliusroemer
Add command to self-upgrade enhancement New feature or request
#269 opened Mar 27, 2023 by corneliusroemer
Windows: Snakemake arguments with file paths containing backslashes produce file not found errors bug Something isn't working papercut Something that works but could be better windows Windows support
#251 opened Jan 17, 2023 by huddlej
[setup] Docker runtime support enhancement New feature or request
#220 opened Sep 27, 2022 by tsibley
ProTip! What’s not been updated in a month: updated:<2024-11-24.