Update github-actions.yml

.github/workflows/github-actions.yml

@@ -3,70 +3,21 @@ on:
  branches: [ "feature/githubactions" ]
 
 jobs:
- test:
+ build:
 
  runs-on: ubuntu-latest
-
- services:
- postgres:
- image: postgres:latest
- env:
- POSTGRES_USER: postgres
- POSTGRES_PASSWORD: postgres
- POSTGRES_DB: github_actions
- ports:
- - 5432:5432
- # needed because the postgres container does not provide a healthcheck
- options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5
-
+
  steps:
- - uses: actions/checkout@v3 #This action checks-out your repository under $GITHUB_WORKSPACE, so your workflow can access it.
- - name: Set up Python 
- uses: actions/setup-python@v4 #This action Installs a version of python
+ - uses: actions/checkout@v2
+ - name: Set up Python 3.9
+ uses: actions/setup-python@v2
  with:
- python-version: "3.9"
- # - name: Before Install
- # run: |
- # sudo systemctl start postgresql.service 
- - name: Install dependencies 
+ python-version: 3.9
+ - name: Install dependencies
  run: |
- python -m pip install --upgrade pip
- #pip install "setuptools<58.0.0"
- pip install toil
- pip install --force-reinstall 'setuptools<58.0.0'
- pip3 install cwl-utils
- pip install toil-cwl-runner
- pip install cwltool
- pip install cwltest
- pip install -r requirements.txt
- 
+ python -m pip install --upgrade pip
+ pip install -r requirements.txt
  - name: Run migrations
  run: python manage.py migrate
  - name: Run tests
  run: python manage.py test
- #uses: py-actions/flake8@v2
- env:
- RIDGEBACK_DB_NAME: github_actions
- RIDGEBACK_DB_PASSWORD: postgres
- RIDGEBACK_DB_USERNAME: postgres
- RIDGEBACK_TOIL_JOB_STORE_ROOT: /sample_path
- RIDGEBACK_TOIL_WORK_DIR_ROOT: /sample_path
- RIDGEBACK_TOIL_TMP_DIR_ROOT: /sample_path
- RIDGEBACK_LSF_WALLTIME: 10:00
- RIDGEBACK_LSF_SLA: SLA
- CELERY_LOG_PATH: /sample_path
- CELERY_PID_PATH: /sample_path
- CELERY_BEAT_SCHEDULE_PATH: /sample_path
- RIDGEBACK_NEXTFLOW_JOB_STORE_ROOT: /sample_path
- RIDGEBACK_NEXTFLOW_WORK_DIR_ROOT: /sample_path
- RIDGEBACK_NEXTFLOW_TMP_DIR_ROOT: /sample_path
- SINGULARITY_PATH: /sample_singularity
- RIDGEBACK_VENV: /sample_path
- RIDGEBACK_PATH: /sample_path
- RIDGEBACK_PORT: 4009
- RIDGEBACK_DEFAULT_QUEUE: sample_queue
- RIDGEBACK_RABBITMQ_USERNAME: sample_username
- RIDGEBACK_RABBITMQ_PASSWORD: sample_password
-
-
-