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Fix python named argument bug in resource function #133

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Fix python named argument bug in resource function

Fix python named argument bug in resource function #133

Triggered via push May 7, 2025 04:18
@lczechlczech
pushed 8123c4f
dev
Status Failure
Total duration 25m 21s
Artifacts 54

ci.yaml

on: push
Matrix: envs
Matrix: example
Matrix: test
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105 errors
envs (ubuntu-24.04, mamba)
Process completed with exit code 127.
envs (ubuntu-22.04, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-bcftools-4, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-bcftools-4, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-bcftools-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-bcftools-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-bcftools-3, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-bcftools-3, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-freebayes-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-freebayes-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-freebayes-3, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-freebayes-3, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-haplotypecaller-3, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-7, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-haplotypecaller-7, mamba)
Process completed with exit code 2.
test (ubuntu-latest, download, mamba)
Process completed with exit code 2.
test (ubuntu-latest, download, mamba)
Process completed with exit code 127.
test (ubuntu-latest, hafpipe-3, mamba)
Process completed with exit code 2.
test (ubuntu-latest, hafpipe-3, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-freebayes-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-freebayes-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-fastp-3, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-fastp-3, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bwa-aln-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mapping-bwa-aln-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, duplicates-dedup-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, duplicates-dedup-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, duplicates-dedup-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, duplicates-dedup-1, mamba)
Process completed with exit code 127.
test (ubuntu-24.04, base)
Process completed with exit code 127.
test (ubuntu-24.04, base)
Process completed with exit code 2.
test (ubuntu-latest, hafpipe-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, hafpipe-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-bcftools-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-bcftools-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-cutadapt-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-cutadapt-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mapping-bwa-mem2-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bwa-aln-4, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mapping-bwa-aln-4, mamba)
Process completed with exit code 2.
test (ubuntu-latest, base, mamba)
Process completed with exit code 127.
test (ubuntu-latest, base, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-seqprep-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-seqprep-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-adapterremoval-3, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-adapterremoval-1, mamba)
Process completed with exit code 2.
test (ubuntu-22.04, base)
Process completed with exit code 127.
test (ubuntu-22.04, base)
Process completed with exit code 2.
test (ubuntu-latest, trimming-skewer-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-skewer-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-skewer-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-skewer-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-8, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-haplotypecaller-8, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-6, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-6, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-4, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-haplotypecaller-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-9, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-haplotypecaller-9, mamba)
Process completed with exit code 2.
test (ubuntu-latest, calling-haplotypecaller-5, mamba)
Process completed with exit code 127.
test (ubuntu-latest, calling-haplotypecaller-5, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bwa-aln-3, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bwa-aln-3, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-fastp-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-fastp-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, hafpipe-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, hafpipe-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mapping-bwa-mem2-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bowtie2-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bowtie2-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mapping-bwa-aln-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bwa-aln-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bwa-mem-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-fastp-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-fastp-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, hafpipe-4, mamba)
Process completed with exit code 2.
test (ubuntu-latest, hafpipe-4, mamba)
Process completed with exit code 127.
test (ubuntu-latest, mappings-table, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mappings-table, mamba)
Process completed with exit code 127.
test (ubuntu-latest, pileup-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, pileup-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-seqprep-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-seqprep-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-adapterremoval-2, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-none, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-none, mamba)
Process completed with exit code 2.
test (ubuntu-latest, trimming-cutadapt-1, mamba)
Process completed with exit code 127.
test (ubuntu-latest, trimming-cutadapt-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bowtie2-1, mamba)
Process completed with exit code 2.
test (ubuntu-latest, mapping-bowtie2-1, mamba)
Process completed with exit code 127.
test (macos-13, base)
Process completed with exit code 127.
test (macos-13, base)
Process completed with exit code 1.
envs (macos-13, mamba)
Process completed with exit code 127.

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