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159 Open 1,539 Closed
159 Open 1,539 Closed
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Issues list

[BUG] anvi-interactive display fails to load, "Bad HTML!! Use -trace to diagnose"
#2407 by bklomparens was closed Mar 6, 2025
1
[BUG] Issue with anvi-profile regarding mismatch in allele counts
#2403 by YongyiPeng was closed Mar 3, 2025
3
[BUG] Cannot install Anvio
#2400 by Ezs377 was closed Feb 21, 2025
4
[BUG] Kaiju parser is broken in by get_TAB_delimited_file_as_dictionary bug
#2398 by Ge0rges was closed Feb 21, 2025
@meren
3
[BUG] anvi-estimate-metabolism fails: KeyError and erroneous module stepwise completeness evaluation?
#2393 by tsvali was closed Jan 30, 2025
4
[BUG] anvi-profile does not report all deletion events bug
#2390 by FlorianTrigodet was closed Jan 29, 2025
1
[BUG] gene_caller_ids get duplicated when using anvi-get-sequences-for-gene-calls most ridiculous bug candidate
#2387 by uguyet was closed Jan 22, 2025
@meren
1
[BUG] KeyError in anvi-estimate-scg-taxonomy
#2386 by jjcolgan was closed Jan 15, 2025
@meren
1
Error with Muscle during anvi-pan-genome
#2385 by Justan6 was closed Jan 13, 2025
7
Interactive interface, TypeError: Cannot read properties of undefined (reading 'split')
#2384 by summerdream2018 was closed Jan 7, 2025
3
The script of anvi-export-gene-clusters is missing
#2383 by drhchen was closed Dec 21, 2024
1
tRNAscan-SE version tested
#2381 by shuqili was closed Dec 18, 2024
1
[BUG] anvi-summarize doesn't report all KOfam annotations when there are multiple for the same gene call bug
#2375 by ivagljiva was closed Nov 26, 2024
1
@ivagljiva
2
[BUG] manual curation import binning to profile.db not working
#2370 by emily-ap was closed Nov 9, 2024
5
[BUG] Colors in the legend not matching the figure
#2367 by FlorianTrigodet was closed Feb 18, 2025
1
@metehaansever
2
[BUG] anvio-summarize : popper.min.js is missing.
#2365 by Louis-MG was closed Nov 4, 2024
18
KeyError: 'modelseed_reaction_id'
#2363 by ranjanmanishblue was closed Oct 30, 2024
3
[BUG] KeyError: 'pop from an empty set'
#2360 by Louis-MG was closed Oct 22, 2024
@meren
1
[BUG] anvi-setup-scg-taxonomy not working - v8
#2358 by FlorianTrigodet was closed Oct 15, 2024
1
[BUG] Error in rule megahit
#2352 by PeymanDerik was closed Oct 4, 2024
8
anvi-draw-kegg-pathways: command not found
#2348 by marlaux was closed Sep 24, 2024
4
[BUG] Python version is incompatible with Anvi'o
#2347 by okcoskun was closed Sep 23, 2024
3
[BUG] Error in anvi-setup-ncbi-cogs: makeblastdb
#2346 by PeymanDerik was closed Sep 22, 2024
@meren
5
[BUG] Insert a short but descriptive title (leave the '[BUG]' part) invalid
#2345 by PeymanDerik was closed Sep 22, 2024
1
[BUG] anvi-script-gen-function-matrix-across-genomes does not know option --skip-checking-genome-hashes
#2343 by Louis-MG was closed Oct 12, 2024
@meren
7
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