v2.4.4

• Fix for prov-metadata generation to filter entity exclusions regardless of authorization or entity scope.
• Apply multhreading when calculating the complete entity response
• Fix SmartAPI yaml auth error

Full Changelog: v2.4.3...v2.4.4

v2.4.3

• New GET /datasets/<id>/prov-metadata endpoint
• Address the lab id exclusion under nested fields from public responses via schema yaml
• Fix bug in GET /documents/<id> with shadow variable being referenced in an error msg
• Tidy up code and comments

Full Changelog: v2.4.2...v2.4.3

v2.4.2

• Omit Dataset.ingest_metadata and Dataset.files from Neo4j results for ancestors/descendants/parents/children calls
• Add back Dataset.metadata to the nested Collection.datasets and Upload.datasets for consistency
• Update to commons 2.1.19 to support new Globus group
• Allow "dataset_type" : "Publication" to pass validation
• Remove validators on Publication.dataset_type

Full Changelog: v2.4.1...v2.4.2

v2.4.1

• Update prov package to 2.0.1
• Exclude unnecessary fields from provenance results

Full Changelog: v2.4.0...v2.4.1

v2.4.0

Reorganize Dataset.ingest_metadata and sub fields:

MOVE:

• Dataset.ingest_metadata.metadata → Dataset.metadata
• Dataset.ingest_metadata.files → Dataset.files

ADD:

• Dataset.calculated_metadata (as JSON text)

Full Changelog: v2.3.30...v2.4.0

v2.3.30

Add Upload.intended_dataset_type and Upload.intended_organ fields

Full Changelog: v2.3.29...v2.3.30

v2.3.29

Exclude files, metadata, and ingest_metadata from Collection and Upload results

Full Changelog: v2.3.28...v2.3.29

v2.3.28

Remove unused assay type methods and references to fix 500 error

Full Changelog: v2.3.27...v2.3.28

v2.3.27

Replace /valueset call to ontology-api with /dataset-types usage.

Full Changelog: v2.3.26...v2.3.27

v2.3.26

The requests package was yanked due to conflicts with CVE-2024-35195 mitigation, update to 2.32.3

Full Changelog: v2.3.25...v2.3.26