Traceback (most recent call last):
File "/opt/galaxy/server/lib/galaxy/util/template.py", line 113, in fill_template
return unicodify(t, log_exception=False)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/galaxy/server/lib/galaxy/util/__init__.py", line 1216, in unicodify
value = str(value)
^^^^^^^^^^
File "/opt/galaxy/venv/lib/python3.11/site-packages/Cheetah/Template.py", line 1057, in __unicode__
return getattr(self, mainMethName)()
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "cheetah_DynamicallyCompiledCheetahTemplate_1776104019_5673347_18244.py", line 266, in respond
File "cheetah_DynamicallyCompiledCheetahTemplate_1776104019_5673347_18244.py", line 87, in getVarCond
File "/opt/galaxy/venv/lib/python3.11/site-packages/Cheetah/Template.py", line 1462, in varExists
valueFromSearchList(self.searchList(),
ValueError: Invalid lookup of empty name
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/opt/galaxy/server/lib/galaxy/tools/evaluation.py", line 126, in global_tool_logs
return func()
^^^^^^
File "/opt/galaxy/server/lib/galaxy/tools/evaluation.py", line 754, in _build_command_line
command_line = fill_template(
^^^^^^^^^^^^^^
File "/opt/galaxy/server/lib/galaxy/util/template.py", line 141, in fill_template
return fill_template(
^^^^^^^^^^^^^^
File "/opt/galaxy/server/lib/galaxy/util/template.py", line 169, in fill_template
raise first_exception or e
File "/opt/galaxy/server/lib/galaxy/util/template.py", line 113, in fill_template
return unicodify(t, log_exception=False)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/opt/galaxy/server/lib/galaxy/util/__init__.py", line 1216, in unicodify
value = str(value)
^^^^^^^^^^
File "/opt/galaxy/venv/lib/python3.11/site-packages/Cheetah/Template.py", line 1057, in __unicode__
return getattr(self, mainMethName)()
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "cheetah_DynamicallyCompiledCheetahTemplate_1776104019_5673347_18244.py", line 159, in respond
File "cheetah_DynamicallyCompiledCheetahTemplate_1776104019_5673347_18244.py", line 87, in getVarCond
File "/opt/galaxy/venv/lib/python3.11/site-packages/Cheetah/Template.py", line 1462, in varExists
valueFromSearchList(self.searchList(),
File "/opt/galaxy/server/lib/galaxy/tools/evaluation.py", line 280, in input
raise InputNotFoundSyntaxError(
galaxy.util.template.InputNotFoundSyntaxError: Unbound variable 'input'.
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/opt/galaxy/server/lib/galaxy/jobs/runners/__init__.py", line 302, in prepare_job
if job_wrapper.prepare() is False:
^^^^^^^^^^^^^^^^^^^^^
File "/opt/galaxy/server/lib/galaxy/jobs/__init__.py", line 1280, in prepare
) = tool_evaluator.build()
^^^^^^^^^^^^^^^^^^^^^^
File "/opt/galaxy/server/lib/galaxy/tools/evaluation.py", line 731, in build
global_tool_logs(self._build_command_line, config_file, "Building Command Line", self.tool)
File "/opt/galaxy/server/lib/galaxy/tools/evaluation.py", line 130, in global_tool_logs
raise ToolTemplatingException(
galaxy.tools.evaluation.ToolTemplatingException: Error occurred while building command line for tool 'toolshed.g2.bx.psu.edu/repos/iuc/picrust2_pipeline/picrust2_pipeline/2.5.3+galaxy0'
