Running multiqc 1.33+galaxy0 on a ~4.2M line, 190MB pairtools dedup output fails with:
grep: /.../dataset_....dat: exceeded PCRE's backtracking limit
The searched strings are actually within the first few lines, but from what I've read, I believe the .* causes grep to start at the end and work backwards, which is where the backtracking limit comes from.
Running multiqc 1.33+galaxy0 on a ~4.2M line, 190MB pairtools dedup output fails with:
The searched strings are actually within the first few lines, but from what I've read, I believe the
.*causes grep to start at the end and work backwards, which is where the backtracking limit comes from.