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Fix Podaacpy issues in Intro_09_Xarray_advanced_hurricane_case_study.ipynb #8

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Fix Podaacpy issues in Intro_09_Xarray_advanced_hurricane_case_study.ipynb #8

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47 changes: 10 additions & 37 deletions ...utorial/.ipynb_checkpoints/Intro_09_Xarray_advanced_hurricane_case_study-checkpoint.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -110,7 +110,7 @@
},
{
"cell_type": "code",
"execution_count": 1,
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -131,7 +131,7 @@
"from podaac import drive as drive\n",
"#note autherntication credentials are provided in the 'podaac.ini' file\n",
"#C:\\\\Users\\\\gentemann\\\\Miniconda3\\\\envs\\\\satenv\\\\lib\\\\site-packages\\\\podaac\\\\tests\\\\podaac.ini\n",
"d = drive.Drive('.\\podaac.ini', None, None)"
"d = drive.Drive(None, 'podaacpy', 'hZHYQ17yuag25zivK8F')"
]
},
{
Expand All @@ -154,14 +154,14 @@
"name": "stdout",
"output_type": "stream",
"text": [
"['https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/227/20110815090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/228/20110816090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/229/20110817090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/230/20110818090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/231/20110819090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/232/20110820090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/233/20110821090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc']\n"
"['https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/227/20110815090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/228/20110816090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/229/20110817090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/230/20110818090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/231/20110819090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/232/20110820090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/233/20110821090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/234/20110822090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/235/20110823090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/236/20110824090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/237/20110825090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/238/20110826090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/239/20110827090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/240/20110828090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/241/20110829090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/242/20110830090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/243/20110831090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/244/20110901090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/245/20110902090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/246/20110903090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/247/20110904090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/248/20110905090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/249/20110906090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/250/20110907090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/251/20110908090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/252/20110909090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/253/20110910090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/254/20110911090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/255/20110912090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/256/20110913090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/257/20110914090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ghrsst/data/GDS2/L4/GLOB/JPL/MUR/v4.1/2011/258/20110915090000-JPL-L4_GHRSST-SSTfnd-MUR-GLOB-v02.0-fv04.1.nc']\n"
]
}
],
"source": [
"#use p.dataset_search to find the dataset id for MUR SST\n",
"#dresult = p.dataset_search(keyword='mur',start_time='2018-09-01T00:00:00Z',end_time='2018-09-30T23:59:59Z')\n",
"gresult = p.granule_search(dataset_id='PODAAC-GHGMR-4FJ04',start_time='2011-08-15T00:00:00Z',end_time='2011-09-15T23:59:59Z')\n",
"gresult = p.granule_search(dataset_id='PODAAC-GHGMR-4FJ04',start_time='2011-08-15T00:00:00Z',end_time='2011-09-15T23:59:59Z', items_per_page='50')\n",
"#use podaac drive to find we provide a convenience function which enables easy access to all Drive urls\n",
"urls = d.mine_drive_urls_from_granule_search(granule_search_response=gresult)\n",
"#podaac drive requires credentials and this isn't compatible with how xarray reads in data, so let's switch to opendap dir by changing file path\n",
Expand Down Expand Up @@ -319,49 +319,22 @@
"metadata": {},
"outputs": [],
"source": [
"#dresult = p.dataset_search(keyword='ccmp',start_time='2011-08-15T00:00:00Z',end_time='2011-09-15T23:59:59Z')\n",
"#dresult"
"# dresult = p.dataset_search(keyword='ccmp',start_time='2011-08-15T00:00:00Z',end_time='2011-09-15T23:59:59Z', items_per_page='50')\n",
"# print(dresult)"
]
},
{
"cell_type": "code",
"execution_count": 6,
"execution_count": null,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"urls: ['https://podaac-tools.jpl.nasa.gov/drive/files/allData/ccmp/L3.0/flk/1987/07/analysis_19870702_v11l30flk.nc.gz', 'https://podaac-tools.jpl.nasa.gov/drive/files/allData/ccmp/L3.0/flk/1987/07/analysis_19870703_v11l30flk.nc.gz', 'https://podaac-tools.jpl.nasa.gov/drive/files/allData/ccmp/L3.0/flk/1987/07/analysis_19870704_v11l30flk.nc.gz', 'https://podaac-tools.jpl.nasa.gov/drive/files/allData/ccmp/L3.0/flk/1987/07/analysis_19870705_v11l30flk.nc.gz', 'https://podaac-tools.jpl.nasa.gov/drive/files/allData/ccmp/L3.0/flk/1987/07/analysis_19870706_v11l30flk.nc.gz', 'https://podaac-tools.jpl.nasa.gov/drive/files/allData/ccmp/L3.0/flk/1987/07/analysis_19870707_v11l30flk.nc.gz', 'https://podaac-tools.jpl.nasa.gov/drive/files/allData/ccmp/L3.0/flk/1987/07/analysis_19870708_v11l30flk.nc.gz']\n",
"['https://podaac-opendap.jpl.nasa.gov/opendap/allData/ccmp/L3.0/flk/1987/07/analysis_19870702_v11l30flk.nc.gz', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ccmp/L3.0/flk/1987/07/analysis_19870703_v11l30flk.nc.gz', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ccmp/L3.0/flk/1987/07/analysis_19870704_v11l30flk.nc.gz', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ccmp/L3.0/flk/1987/07/analysis_19870705_v11l30flk.nc.gz', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ccmp/L3.0/flk/1987/07/analysis_19870706_v11l30flk.nc.gz', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ccmp/L3.0/flk/1987/07/analysis_19870707_v11l30flk.nc.gz', 'https://podaac-opendap.jpl.nasa.gov/opendap/allData/ccmp/L3.0/flk/1987/07/analysis_19870708_v11l30flk.nc.gz']\n",
"<xarray.Dataset>\n",
"Dimensions: (lat: 628, lon: 1440, time: 4)\n",
"Coordinates:\n",
" * lon (lon) float32 0.125 0.375 0.625 0.875 ... 359.375 359.625 359.875\n",
" * lat (lat) float32 -78.375 -78.125 -77.875 ... 77.875 78.125 78.375\n",
" * time (time) datetime64[ns] 1987-07-02 ... 1987-07-02T18:00:00\n",
"Data variables:\n",
" uwnd (time, lat, lon) float32 ...\n",
" vwnd (time, lat, lon) float32 ...\n",
" nobs (time, lat, lon) float32 ...\n",
"Attributes:\n",
" Conventions: COARDS\n",
" title: Atlas FLK v1.1 derived surface winds (le...\n",
" description: VAM 6-hour analyses starting from the EC...\n",
" history: Created by NASA Goddard Space Flight Cen...\n",
" base_date: [1987 7 2]\n",
" DODS_EXTRA.Unlimited_Dimension: time\n"
]
}
],
"outputs": [],
"source": [
"#ccmp\n",
"#dresult = p.dataset_search(keyword='ccmp',start_time='2018-09-01T00:00:00Z',end_time='2018-09-15T23:59:59Z')\n",
"gresult = p.granule_search(dataset_id='PODAAC-CCF30-01XXX',start_time='2011-08-15T00:00:00Z',end_time='2011-09-15T23:59:59Z')\n",
"gresult = p.granule_search(dataset_id='PODAAC-CCF30-01XXX',start_time='2011-08-15T00:00:00Z',end_time='2011-09-15T23:59:59Z', items_per_page='50', sort_by='timeDesc')\n",
"#use podaac drive to find we provide a convenience function which enables easy access to all Drive urls\n",
"#print(gresult)\n",
"urls = d.mine_drive_urls_from_granule_search(granule_search_response=gresult)\n",
"print('urls:',urls)\n",
"urls_wnd = [w.replace('-tools.jpl.nasa.gov/drive/files/', '-opendap.jpl.nasa.gov/opendap/') for w in urls]\n",
"print(urls_wnd)\n",
"url = urls_wnd[0] \n",
Expand Down Expand Up @@ -765,7 +738,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.3"
"version": "3.7.4"
}
},
"nbformat": 4,
Expand Down
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