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@biocompute-objects

BioCompute

BioCompute supports the IEEE 2791-2020 standard for bioinformatics pipelines/workflows in the High-Throughput Sequencing (HTS) space.

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  1. galaxy galaxy Public

    Forked from galaxyproject/galaxy

    Data intensive science for everyone.

    Python 2 1

  2. examples examples Public archive

    repo for BCO example flat files

    1

  3. bco-app bco-app Public

    Forked from sbg/bco-app

    BCO App by Seven Bridges

    R 1

  4. bco-ro-crate bco-ro-crate Public

    Tutorial and specification for packaging IEEE 2791-2020 BCOs as RO-Crate Research Objects

    1

  5. bco_api bco_api Public

    The master repository for the JSON API.

    Python 2 2

  6. portal_userdb portal_userdb Public

    JavaScript 1 1

Repositories

Showing 10 of 43 repositories
  • bco-rag Public

    BioCompute Object Retrieval-Augmented Generation Tool

    biocompute-objects/bco-rag’s past year of commit activity
    Python 0 MIT 0 6 0 Updated Dec 16, 2024
  • bco_api Public

    The master repository for the JSON API.

    biocompute-objects/bco_api’s past year of commit activity
    Python 2 MIT 2 6 0 Updated Oct 31, 2024
  • portal_userdb Public
    biocompute-objects/portal_userdb’s past year of commit activity
    JavaScript 1 1 99 (1 issue needs help) 2 Updated Oct 31, 2024
  • pdf_to_bco_script Public

    A preliminary script for converting pdfs into biocompute objects. Accuracy varies from section to section.

    biocompute-objects/pdf_to_bco_script’s past year of commit activity
    0 0 0 0 Updated Aug 27, 2024
  • playbook-partnership Public Forked from MaayanLab/Playbook-Workflow-Builder

    A repository for playbook partnership collaboration.

    biocompute-objects/playbook-partnership’s past year of commit activity
    TypeScript 0 18 9 0 Updated Aug 12, 2024
  • dnanexus Public
    biocompute-objects/dnanexus’s past year of commit activity
    Python 0 MIT 2 1 1 Updated Aug 2, 2024
  • linked-data-hub Public

    Linked Data Hub Schema and Script

    biocompute-objects/linked-data-hub’s past year of commit activity
    Python 0 0 0 0 Updated Jul 25, 2024
  • BCO_Documentation Public

    Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:

    biocompute-objects/BCO_Documentation’s past year of commit activity
    HTML 16 BSD-3-Clause 12 9 (1 issue needs help) 0 Updated Jul 22, 2024
  • w3id.org Public Forked from perma-id/w3id.org

    Website source code for w3id.org

    biocompute-objects/w3id.org’s past year of commit activity
    HTML 0 1,257 0 0 Updated Jul 18, 2024
  • bco2markdown Public

    Code for converting a BCO to a Markdown file

    biocompute-objects/bco2markdown’s past year of commit activity
    Python 0 0 0 0 Updated Jul 9, 2024
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