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Stop pinning urllib3 (only done for testing dep) #69

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Merged
merged 4 commits into from
Oct 29, 2024
Merged

Stop pinning urllib3 (only done for testing dep) #69

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6f3e4d4
Stop pinning urllib3 (only done for testing dep)
DavidCain Sep 6, 2024
222b1c2
update devready
ahwagner Oct 29, 2024
81349d2
update cassettes
ahwagner Oct 29, 2024
a9d1eb5
update Ensembl transcript query to versioned accession
ahwagner Oct 29, 2024
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10 changes: 5 additions & 5 deletions Makefile
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Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ SHELL:=/bin/bash -e -o pipefail
SELF:=$(firstword $(MAKEFILE_LIST))

PY_VERSION:=$(shell python3 --version | cut -d" " -f2 | cut -d. -f1-2)
VE_DIR=venv
VE_DIR=venv/${PY_VERSION}

$(info Using Python ${PY_VERSION})

Expand Down Expand Up @@ -38,12 +38,12 @@ devready:
@echo '#################################################################################'

#=> venv: make a Python 3 virtual environment
venv: ${VE_DIR}
${VE_DIR}: venv/%:
python$* -mvenv $@; \
.PHONY: venv/%
venv/%:
python$* -m venv $@; \
source $@/bin/activate; \
python -m ensurepip --upgrade; \
pip install --upgrade pip setuptools wheel
pip install --upgrade pip setuptools

#=> develop: install package in develop mode
#=> develop: install package in develop mode
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5 changes: 2 additions & 3 deletions pyproject.toml
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Expand Up @@ -28,7 +28,6 @@ dynamic = ["version"]
dependencies = [
"attrs",
"requests",
"urllib3~=1.26",
]

[project.optional-dependencies]
Expand Down Expand Up @@ -74,8 +73,8 @@ doctest_optionflags = [
"NORMALIZE_WHITESPACE",
]
markers = [
"network: tests that require network connectivity",
"slow: slow tests that should be run infrequently",
"network: tests that require network connectivity",
"slow: slow tests that should be run infrequently",
]
testpaths = [
"tests"
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