Pinned

1. hgvs hgvs Public

   Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

   Python 233 94

2. uta uta Public

   Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image

   Python 61 26

3. bioutils bioutils Public

   provides common tools and lookup tables used primarily by the hgvs and uta packages

   Python 19 18

4. biocommons.seqrepo biocommons.seqrepo Public

   non-redundant, compressed, journalled, file-based storage for biological sequences

   Python 39 35

5. eutils eutils Public

   simplified searching, fetching, and parsing records from NCBI using their E-utilities interface

   Python 56 26

6. seqrepo-rest-service seqrepo-rest-service Public

   OpenAPI-based REST interface to biological sequences and sequence metadata

   Python 4 6