Skip to content

SBEToolbox: A Matlab Toolbox for Biological Network Analysis

Latest
Latest
Compare
Choose a tag to compare
@biocoder biocoder released this 15 May 15:43
· 1 commit to master since this release
v1.3.3
e3b0093

LICENSE

We present SBEToolbox (Systems Biology and Evolution Toolbox), an open-source Matlab toolbox for biological network analysis. It takes a network file as input, calculates a variety of centralities and topological metrics, clusters nodes into modules, and displays the network using different graph layout algorithms. Straightforward implementation and the inclusion of high-level functions allow the functionality to be easily extended or tailored through developing custom plugins. SBEGUI, a menu-driven Graphical User Interface (GUI) of SBEToolbox enables easy access to various network and graph algorithms for programmers and non-programmers alike.

Documentation : https://promis.tamu.edu/projects/sbetoolbox/wiki/SBEToolbox_User_Manual

Reference DOI

Konganti K, Wang G, Yang E, Cai JJ* (2013). SBEToolbox: a Matlab Toolbox for Biological Network Analysis. Evolutionary Bioinformatics 2013:9 355-362

sbegui_v1

Checkout repo :

  • Stable

    • Git :

      git clone https://github.com/biocoder/SBEToolbox.git
cd SBEToolbox
git checkout v1.3.3

    • Subversion :

      svn co https://github.com/biocoder/SBEToolbox/tags/v1.3.3 SBEToolbox_v1.3.3
  • Development

    • Git :

      git clone https://github.com/biocoder/SBEToolbox.git

    • Subversion :

      svn co https://github.com/biocoder/SBEToolbox/trunk
Assets 2
Loading