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Add section for adding singularity args #250

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merged 1 commit into from
Mar 22, 2025
Merged

Add section for adding singularity args #250

merged 1 commit into from
Mar 22, 2025

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mattcieslak
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closes #237

Adds a section to the yaml file where you can specify singularity/apptainer arguments. Because this could be ambiguous with how the BIDS App args section was named, it was renamed from singularity_run to bids_app_args and the new section is called singularity_args.

@mattcieslak mattcieslak merged commit 1fb85a1 into main Mar 22, 2025
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@mattcieslak mattcieslak deleted the add-singularity-args branch March 22, 2025 03:40
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tsalo commented Mar 24, 2025

This probably should have closed #250 too, right?

@tsalo tsalo added enhancement New feature or request container Issues related to container software (e.g., Singularity, Apptainer) labels Mar 24, 2025
@mattcieslak mattcieslak mentioned this pull request Mar 24, 2025
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container Issues related to container software (e.g., Singularity, Apptainer) enhancement New feature or request
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Successfully merging this pull request may close these issues.

singularity --containall doesn't work on MIT cluster
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