Skip to content

Issues: x-atlas-consortia/hs-ontology-api

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Clear current search query, filters, and sorts
5 Open 50 Closed
5 Open 50 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Update cell-types endpoints for STELLAR, DeepCellType mappings enhancement New feature or request HuBMAP/SenNet
#155 by AlanSimmons was closed Jan 21, 2025
1
@AlanSimmons
1
add MIT license to repo enhancement New feature or request wontfix This will not be worked on
#154 by AlanSimmons was closed Dec 19, 2024
@AlanSimmons
Move out development assay service to its own repo
#153 by yuanzhou was closed Nov 12, 2024
@yuanzhou
1
Optionally provide hierarchy information and measurement assay
#143 by shirey was closed Feb 13, 2025
@AlanSimmons
3
Synchronize assayclasses.json with endpoint response from /assayclasses endpoint maintenance
#141 by AlanSimmons was closed Oct 24, 2024
@AlanSimmons
1
Deprecate legacy assaytypes and assayname endpoints enhancement New feature or request HuBMAP/SenNet
#135 by AlanSimmons was closed Feb 13, 2025
@AlanSimmons
1
Enhance dataset-types endpoint to identify Epic dataset types and filter enhancement New feature or request HuBMAP/SenNet
#131 by AlanSimmons was closed Oct 9, 2024
1
@AlanSimmons
1
Enhance organs endpoint to support polyhierarchical organization of organs enhancement New feature or request HuBMAP/SenNet
#130 by AlanSimmons was closed Feb 13, 2025
1
@AlanSimmons
3
Dockerize soft assay classes development server
#127 by yuanzhou was closed Sep 17, 2024
@yuanzhou
ontology soft assay type endpoints development server
#116 by shirey was closed Sep 6, 2024
@ChuckKollar
3
ensure case-insensitivity for application_context bug Something isn't working
#111 by AlanSimmons was closed Dec 16, 2024
1
@AlanSimmons
3
Updates to gateway for new codes and concepts endpoints enhancement New feature or request HuBMAP/SenNet
#108 by AlanSimmons was closed Sep 6, 2024
@yuanzhou
1
new endpoint: dataset_types, with categorization enhancement New feature or request HuBMAP/SenNet
#105 by AlanSimmons was closed Sep 6, 2024
1
@AlanSimmons
Changes to gateway enhancement New feature or request HuBMAP/SenNet
#104 by AlanSimmons was closed Sep 6, 2024
@yuanzhou
3
new endpoints that return information from new rule-based dataset model enhancement New feature or request
#102 by AlanSimmons was closed Sep 6, 2024
@AlanSimmons
1
remove alt-names array from datasets endpoint enhancement New feature or request HuBMAP/SenNet wontfix This will not be worked on
#101 by AlanSimmons was closed Jul 9, 2024
@AlanSimmons
1
Enhancement: Categorize assay classifications to match groupings shown in the "Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)" Nature article enhancement New feature or request HuBMAP/SenNet P Pitt
#100 by AlanSimmons was closed Aug 6, 2024 due by 7/31/2024
@shirey @AlanSimmons
1
Enhancement: show encoding for assay modality enhancement New feature or request HuBMAP/SenNet
#97 by AlanSimmons was closed Aug 6, 2024 due by 7/31/2024
@AlanSimmons
1
Update to Flask v3.x P Pitt
#95 by shirey was closed Aug 6, 2024
@ChuckKollar
1
Include endpoints from ubkg-api to hs-ontology-api P Pitt
#94 by yuanzhou was closed Jun 25, 2024
@kburke
2
Enhancement: filter datasets and dataset types by active/inactive status enhancement New feature or request HuBMAP/SenNet
#93 by AlanSimmons was closed Sep 6, 2024
@AlanSimmons
7
Add indexes to optimize biological entity endpoints dependencies Pull requests that update a dependency file enhancement New feature or request HuBMAP/SenNet
#89 by AlanSimmons was closed Feb 13, 2025
1
@AlanSimmons
1
Remove the /status endpoint and rely on ubkg-api status endpoint P Pitt
#81 by shirey was closed Apr 16, 2024
@ChuckKollar
2
Compare endpoint results using code running against a Neo4J V4 and V5 database P Pitt
#80 by ChuckKollar was closed Feb 20, 2024
@ChuckKollar
1
Modify organs query bug Something isn't working HuBMAP/SenNet
#71 by AlanSimmons was closed Mar 26, 2024
@AlanSimmons
ProTip! Updated in the last three days: updated:>2025-03-05.