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Overlapping super locus error can be marked even if the individual transcript does not overlap #196

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soi opened this issue Nov 4, 2019 · 0 comments
Open

Overlapping super locus error can be marked even if the individual transcript does not overlap #196

soi opened this issue Nov 4, 2019 · 0 comments
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bug Something isn't working database

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soi commented Nov 4, 2019 •
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Currently an overlap is only checked for the whole super locus and it is only looked up if utr errors occur for any transcript. So it is entirely possible that an super_loci_overlap_error gets inserted for a transcript that does not overlap and does not have an utr error in itself.

However there should never be an overlap that does not get marked in any way, which should be enough for Helixer.
@soi soi added bug Something isn't working data format database and removed data format labels Nov 4, 2019
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