Update from feeds: https://galaxyproject.org/news/2025-02-13-cellxgene-vip/ #189
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👋 Hello! I'm your friendly social media assistant. Below are the previews of this post: matrix-eu-announce
📝 New blog post Released! https://galaxyproject.org/news/2025-02-13-cellxgene-vip/ CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE tool developed by the Chan Zuckerberg Initiative. It can efficiently extract deep insights from single-cell RNA sequencing, spatial transcriptomics, and emerging multiome datasets. This integration enhances the capabilities of high-throughput data exploration and visualization, bridging the gap between computational power and user-friendly analysis. While CELLxGENE focuses on fast and interactive visualization of single-cell data, CELLxGENE-VIP goes a step further by integrating interactive processing and customized visual analytics, providing deeper insights into the data.
Different QC plots by CELLxGENE in no-time! Spatial transcriptomics embedding aligned with histological image on one slice! Multiome data visualization showing the spectral embedding and TSS enrichment score CELLxGENE-VIP helps researchers go beyond visualization, making single-cell analysis more intuitive, reproducible, and insightful. Whether you are an experienced programmer or not, with this tool you can generate multiple QC plots fast and deep dive into your data and unlock new discoveries in your research. Have a look at the CELLxGENE-VIP Documentation for more information. Try it out on Galaxy today and take your analysis to the next level! linkedin-galaxyproject📝 New blog post Released! CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE: https://github.com/chanzuckerberg/cellxgene tool developed by the Chan Zuckerberg Initiative. This integration enhances the capabilities of high-throughput data exploration and visualization, bridging the gap between computational power and user-friendly analysis.
Different QC plots by CELLxGENE in no-time! Spatial transcriptomics embedding aligned with histological image on one slice! Multiome data visualization showing the spectral embedding and TSS enrichment score CELLxGENE-VIP helps researchers go beyond visualization, making single-cell analysis more intuitive, reproducible, and insightful. Have a look at the CELLxGENE-VIP Documentation: https://interactivereport.github.io/cellxgene_VIP/tutorial/docs/ for more information. Try it out on Galaxy today and take your analysis to the next level! Start CELLxGENE VIP now: https://usegalaxy.eu/?tool_id=interactive_tool_cellxgene_vip&version=latest
mastodon-eu-freiburg📝 New blog post Released! CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE: https://github.com/chanzuckerberg/cellxgene tool developed by the Chan Zuckerberg Initiative. This integration enhances the capabilities of high-throughput data exploration and visualization, bridging the gap between computational power and user- (1/7) friendly analysis.
compositions and deep biology, such as marker gene identification, differential gene expression analysis, and gene set enrichment analysis.
Different QC plots by CELLxGENE in no-time! (3/7) Spatial transcriptomics embedding aligned with histological image on one slice! (4/7) Multiome data visualization showing the spectral embedding and TSS enrichment score (5/7) CELLxGENE-VIP helps researchers go beyond visualization, making single-cell analysis more intuitive, reproducible, and insightful. Have a look at the CELLxGENE-VIP Documentation: https://interactivereport.github.io/cellxgene_VIP/tutorial/docs/ for more information. Try it out on Galaxy today and take your analysis to the next level! Start CELLxGENE (6/7) VIP now: https://usegalaxy.eu/?tool_id=interactive_tool_cellxgene_vip&version=latest
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👋 Hello! I'm your friendly social media assistant. Below are the previews of this post: bluesky-galaxyproject📝 New blog post Released! CELLxGENE-VIP (Visualization In Plugin) is an extension of the original CELLxGENE: https://github.com/chanzuckerberg/cellxgene tool developed by the Chan Zuckerberg Initiative. insights from single-cell RNA sequencing, spatial transcriptomics, and emerging multiome datasets. This integration enhances the capabilities of high-throughput data exploration and visualization, bridging the gap between computational power and user-friendly analysis. focuses on fast and interactive visualization of single-cell data, CELLxGENE-VIP goes a step further by integrating interactive processing and customized visual analytics, providing deeper insights into the data.
control and analytical plots in high resolution with highly customizable settings.
analysis.
Different QC plots by CELLxGENE in no-time! (5/10) Spatial transcriptomics embedding aligned with histological image on one slice! (6/10) Multiome data visualization showing the spectral embedding and TSS enrichment score (7/10) CELLxGENE-VIP helps researchers go beyond visualization, making single-cell analysis more intuitive, reproducible, and insightful. in your research. Have a look at the CELLxGENE-VIP Documentation: https://interactivereport.github.io/cellxgene_VIP/tutorial/docs/ for more information. Try it out on Galaxy today and take your analysis to the next level! Start CELLxGENE VIP now: (9/10) https://usegalaxy.eu/?tool_id=interactive_tool_cellxgene_vip&version=latest
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Update since 2025-01-31
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CellxGene-VIP scRNA-seq, spatial transcriptomics, and multiome data visualization