DecontaMiner is a tool designed and developed to investigate the presence of contaminating sequences in unmapped NGS data. It can suggest the presence of contaminating organisms in sequenced samples, that might derive either from laboratory contamination or from their biological source, and in both cases can be considered as worthy of further in…
bioinformatics
rna-seq
virus
cancer
ngs
sequencing
rnaseq
bacteria
omics
fungus
contamination
investigation
contamination-detection
microbes
infections
unmapped-ngs-data
contaminating-sequences
decontaminer-pipeline
decontaminer
virusscan
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Updated
Nov 6, 2023 - Perl