Kuanhao-Chao / splam Star 30 Code Issues Pull requests ✂️ Deep learning-based splice site predictor that improves spliced alignments rna-seq deep-learning annotation alignment convolutional-neural-networks residual-networks spliced-alignment splice-junctions splicing transcript-assembly Updated May 5, 2024 C++
Kuanhao-Chao / Transcript_Quantifier_Assessment Star 4 Code Issues Pull requests 🩺 Assessing StringTie, Salmon, and Kallisto with simulated RNA-Seq reads with noises introduced in read- and annotation-level. rna-seq assembly gtex transcriptomics read-simulation transcript-quantification transcript-assembly transcript-noise Updated May 1, 2022 Shell
dzhang32 / tuni Star 0 Code Issues Pull requests Unify transcripts across different samples gtf gff transcript-assembly Updated Jun 9, 2024 Rust