sourmash-bio / sourmash Star 439 Code Issues Pull requests Quickly search, compare, and analyze genomic and metagenomic data sets. python rust bioinformatics minhash sketching kmer hacktoberfest taxonomic-classification sourmash taxonomic-profiling scaled-minhash fracminhash Updated May 27, 2024 Python
shenwei356 / kmcp Star 173 Code Issues Pull requests Accurate metagenomic profiling && Fast large-scale sequence/genome searching sketch metagenomics sketching cobs kmer searching virome taxonomic-classification taxonomic-profiling scaled-minhash syncmers bigsi fracminhash Updated Sep 22, 2023 Go
shenwei356 / bio Star 88 Code Issues Pull requests A lightweight and high-performance bioinformatics package in Golang golang package bioinformatics taxonomy sequence taxdump minimizer syncmer scaled-minhash Updated Mar 11, 2024 Go