RNA-seq workflow using STAR and DESeq2
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Updated
Jun 5, 2024 - Python
RNA-seq workflow using STAR and DESeq2
scripts and resources for performing miRNA sequencing analysis using tools like mirPRo and miRDeep2. Explore the code to process reads, map them to the genome, quantify known miRNAs, identify novel miRNAs, and browse the results
RNA-Seq analysis pipeline for investigating transcriptional changes during mammalian cardiac regeneration.
RBP-Data-Processing is a repository containing R code for processing RNA-binding protein (RBP) datasets. The code imports the data table, performs data cleaning and transformation operations, and saves the processed dataset. It provides a convenient and reproducible workflow for analyzing RBP data obtained from external sources.
Scaled matrix completion and cell deconvolution with NanoString data, Yichen Zhang, 2019
Code and analysis scripts for analyzing newly transcribed RNA in large-scale compound screen experiments
Bioinformatics package created in C# and python, which can analyze biological data such as DNA, RNA and protein sequences, Biological Databases Scrapping, As well as 'GEO Analysis' offers a variety of analysis on RNA-seq. Preprocessing, parsing various biological file formats (FASTA, PDB, SOFT, FASTQ, etc.), this all using C# language and dotnet.
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