ampliconarchitect

Here are 2 public repositories matching this topic...

nf-core / circdna

Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.

workflow pipeline genomics nextflow dna circular nf-core extrachromosomal-circular-dna eccdna ecdna ampliconarchitect circle-seq ampliconsuite

Updated May 9, 2024
Python

AmpliconSuite / AmpliconClassifier

Star

Classify output of AmpliconArchitect to detect types of focal amplifications present

python-library amplicons focal double-minutes bfb ecdna ampliconarchitect

Updated May 1, 2024
Python

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