read-stitcher

Efficiently merge overlapping paired-end reads using suffix trees

Name		Name	Last commit message	Last commit date
Latest commit History 25 Commits
htslib @ 50db54b		htslib @ 50db54b
.gitignore		.gitignore
.gitmodules		.gitmodules
LICENSE		LICENSE
Makefile		Makefile
README.md		README.md
bgzf_streams.h		bgzf_streams.h
error.cpp		error.cpp
error.h		error.h
fastq_reader.cpp		fastq_reader.cpp
fastq_reader.h		fastq_reader.h
fastq_writer.cpp		fastq_writer.cpp
fastq_writer.h		fastq_writer.h
kmer_counter.cpp		kmer_counter.cpp
kmer_counter.h		kmer_counter.h
lca.cpp		lca.cpp
lca.h		lca.h
main.cpp		main.cpp
plot_stitching_stats.py		plot_stitching_stats.py
read_info.cpp		read_info.cpp
read_info.h		read_info.h
read_stitcher.cpp		read_stitcher.cpp
read_stitcher.h		read_stitcher.h
stringops.cpp		stringops.cpp
stringops.h		stringops.h
suffix_tree.cpp		suffix_tree.cpp
suffix_tree.h		suffix_tree.h
version.cpp		version.cpp
version.h		version.h

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