.

bin/config/Readme.txt

@@ -0,0 +1,12 @@
+The config directory contains the following files to tell to openmc and ERSN-OPENMC softwares where to find paths:
+
+0. this Readme.txt
+1. cross_sections.dir     points to the full path of data/nndc/cross_sections.xml file
+2. openmc.dir                                     of binary .../openmc/bin/openmc file
+3. scripts.dir                                    of python .../openmc/scripts    folder
+
+You could change manually the paths if you don't need to reinstall openmc code.
+In the case of fresh installation of openmc the files are configured automaticaly.
+
+
+

bin/config/cross_sections.dir

@@ -0,0 +1 @@
+/home/tarek/OpenMC-New/data/nndc/cross_sections.xml

bin/config/openmc.dir

@@ -0,0 +1 @@
+/home/tarek/OpenMC-New/openmc/bin/openmc

bin/config/scripts.dir

@@ -0,0 +1 @@
+/home/tarek/OpenMC-New/openmc/scripts

bin/scripts/get_hdf5.sh

@@ -0,0 +1,28 @@
+#!/bin/bash
+#
+wget ftp://ftp.hdfgroup.org/HDF5/current/src/hdf5-*.tar.gz
+#
+tar -xzvf hdf5-*.tar.gz
+
+cd hdf5-*; ./configure --prefix=/opt/hdf5  --enable-fortran \
+           --enable-fortran2003
+#
+make
+# make check
+sudo make install
+#
+cd ..
+rm  hdf5-*.tar.gz
+rm -R hdf5-*;
+
+echo "           *********************************************"
+echo "               installation of hdf5 has been finished"
+echo "           *********************************************"
+echo " "
+printf "Press 'CTRL+C' to exit : "
+trap "exit" INT
+while :
+do
+    sleep 10000 
+done
+

bin/scripts/get_hdf5_parallel.sh

@@ -0,0 +1,29 @@
+#!/bin/bash
+#
+echo " HDF5 IN PARALLEL MODE"
+wget ftp://ftp.hdfgroup.org/HDF5/current/src/hdf5-*.tar.gz
+#
+tar -xzvf hdf5-*.tar.gz
+
+cd hdf5-*; ./configure --prefix=/opt/hdf5  --enable-fortran \
+           --enable-fortran2003 --enable-parallel
+#
+make
+# make check
+sudo make install
+#
+cd ..
+rm  hdf5-*.tar.gz
+rm -R hdf5-*;
+
+echo "           *********************************************"
+echo "               installation of hdf5 has been finished"
+echo "           *********************************************"
+echo " "
+printf "Press 'CTRL+C' to exit : "
+trap "exit" INT
+while :
+do
+    sleep 10000 
+done
+

bin/scripts/get_nndc.sh

@@ -0,0 +1,25 @@
+#!/bin/bash
+
+openmc_dir=$1
+if [  $openmc_dir !="" ]; then
+   tmp=$(cat ../config/cross_sections.dir)
+   xfolder=${tmp%/*} 
+   cd $xfolder
+   cd ../..
+   openmc_dir=$(pwd)
+fi
+cd  $openmc_dir/openmc/data
+#
+python get_nndc_data.py
+
+echo "           *********************************************"
+echo "               download of nndc data has been finished"
+echo "           *********************************************"
+echo " "
+printf "Press 'CTRL+C' to exit : "
+trap "exit" INT
+while :
+do
+    sleep 10000 
+done
+

bin/scripts/get_openmc-with-mpich2.sh

@@ -0,0 +1,50 @@
+#!/bin/bash
+petsc=""
+HDF5_STATUS=$2
+PETSC_STATUS=$3
+
+if [ $HDF5_STATUS=="USED" ]; then
+      export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/hdf5/lib
+      export FC=h5pfc
+else
+      export FC=mpif90
+fi
+
+
+if [ $PETSC_STATUS=="USED" ]; then
+      export  PETSC_DIR= /opt/petsc-3.4.4
+      export PETSC_ARCH=linux-gnu-intel
+      PETSC_OPTION="-Dpetsc=on"
+else
+      echo " PETSC NOT USED"     
+fi
+cd  $install_dir
+#
+git clone https://github.com/mit-crpg/openmc.git
+#
+cd openmc
+#
+git checkout master
+#
+make clean
+#
+find -iname '*cmake*' -not -name CMakeLists.txt -exec rm -rf {} \+
+
+cmake -Ddebug=on $PETSC_OPTION .
+#
+make
+#
+sudo make install -e prefix=$install_dir/openmc
+
+echo "    ***********************************************************************************"
+echo "            Parallel version (MPICH2) of OpenMC has been installed succesfully"
+echo "    ***********************************************************************************"
+
+echo " "
+printf "Press 'CTRL+C' to exit : "
+trap "exit" INT
+while :
+do
+    sleep 10000 
+done
+

bin/scripts/get_openmc-with-openmpi.sh

@@ -0,0 +1,62 @@
+#!/bin/bash
+##################################################################
+PETSC_OPTION=""
+INSTALL_DIR=$1
+HDF5_STATUS=$2
+PETSC_STATUS=$3
+
+
+##################################################################
+if [ $HDF5_STATUS=="USED" ]; then
+    echo "HDF5 USED"
+    export PATH=/opt/hdf5/bin:$PATH
+    export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
+    export FC=h5pfc
+else
+    export "HDF5 NOT USED"
+fi
+
+if [ $PETSC_STATUS=="NOT-USED" ]; then
+    export PETSC_DIR=/opt/petsc-3.4.4
+    export PETSC_ARCH=linux-gnu-intel
+    PETSC_OPTION="-Dpetsc=on"
+    echo "PTSC USED"
+else
+    echo "PTSC NOT USED"
+fi
+########################################################
+#
+cd  $INSTALL_DIR
+#
+git clone https://github.com/mit-crpg/openmc.git
+#
+cd openmc
+#
+git checkout master
+#
+
+#########################################################
+make clean
+#
+find -iname '*cmake*' -not -name CMakeLists.txt -exec rm -rf {} \+
+
+cmake -Ddebug=on -Dopenmp=on PETSC_OPTION .
+#
+make
+#
+sudo make install -e prefix=$INSTALL_DIR/openmc
+
+#########################################################
+
+echo " "
+echo "              *************************************************  "
+echo "                 OpenMC // OMP  version has been installed    "
+echo "              *************************************************  "
+
+echo " "
+printf "Press 'CTRL+C' to exit : "
+trap "exit" INT
+while :
+do
+    sleep 10000 
+done

bin/scripts/get_openmc.sh

@@ -0,0 +1,66 @@
+#!/bin/bash
+
+PETSC_OPTION=""
+INSTALL_DIR=$1
+HDF5_STATUS=$2
+PETSC_STATUS=$3
+
+echo $HDF5_STATUS
+
+if [ $HDF5_STATUS=="USED" ]; then
+    export PATH=/opt/hdf5/bin:$PATH
+    echo " HDF5_STATUS: USED"
+    export LD_LIBRARY_PATH=/opt/hdf5/lib:$LD_LIBRARY_PATH
+    HDF5=$(which h5fc)
+    if [ "$HDF5" != "/opt/hdf5/bin/h5fc" ]; then
+        export FC="gfortran"
+        echo " h5fc not found, gfortran is used "
+    else
+        export FC="h5fc"
+        echo " h5fc found "
+    fi
+else
+    echo " HDF5_STATUS: NOT-USED"
+fi
+
+
+if [ $PETSC_STATUS=="USED" ]; then
+    echo " PETSC_STATUS: USED"
+    export PETSC_DIR=/opt/petsc-3.4.4
+    PETSC_OPTION="-Dpetsc=on"
+else
+    echo " PETSC_STATUS: NOT-USED"
+    PETSC_OPTION=""
+fi
+
+#
+cd  $INSTALL_DIR
+#
+git clone https://github.com/mit-crpg/openmc.git
+#
+cd openmc
+#
+git checkout master
+#
+make clean
+#
+find -iname '*cmake*' -not -name CMakeLists.txt -exec rm -rf {} \+
+
+cmake  -Ddebug=on  PETSC_OPTION .
+#
+make 
+sudo make install -e prefix=$INSTALL_DIR/openmc
+
+echo "              *************************************************  "
+echo "                 OpenMC sequential version has been installed    "
+echo "              *************************************************  "
+
+echo " "
+printf "Press 'CTRL+C' to exit : "
+trap "exit" INT
+while :
+do
+    sleep 10000 
+done
+
+

bin/scripts/get_petsc.sh

@@ -0,0 +1,32 @@
+#!/bin/bash
+#
+wget http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.4.4.tar.gz
+#
+tar -xzvf petsc-3.4.4.tar.gz
+#
+cd petsc*; ./configure --prefix=/opt/petsc-3.4.4 --download-f-blas-lapack \
+   --with-shared-libraries \
+            --with-fortran-datatypes
+#
+make PETSC_ARCH=linux-gnu-intel  PETSC_DIR= /opt/petsc-3.4.4
+# make check
+sudo make install
+#
+cd ..
+#
+rm  petsc-3.4.4.tar.gz
+#
+rm -R petsc-3.4.4/
+
+echo "               ******************************************"
+echo "                PETSC-3.4.4 installing has been finished"
+echo "               ******************************************"
+
+echo " "
+printf "Press 'CTRL+C' to exit : "
+trap "exit" INT
+while :
+do
+    sleep 10000 
+done
+

bin/scripts/openmc-xml-validation.sh

@@ -0,0 +1,50 @@
+
+#!/bin/bash
+openmc_project_dir=$1
+openmc_xml_validation_dir=$2
+openmc_relaxng_dir=$3
+
+# delete OpenMC XML file until it is empty
+cmfd_file=$openmc_project_dir"/cmfd.xml"
+plot_file=$openmc_project_dir"/plots.xml"
+tallies_file=$openmc_project_dir"/tallies.xml"
+#
+
+if [ -f $cmfd_file  ]; then
+     if [ -s $cmfd_file  ];then
+          echo ""
+     else
+          rm  $cmfd_file
+     fi
+fi
+
+if [ -f $plot_file ];then
+      if [ -s $plot_file ];then
+           echo ""
+      else
+           rm  $plot_file
+      fi
+fi
+
+if [ -f $tallies_file ];then
+      if [ -s $tallies_file ];then
+           echo ""
+      else
+           rm  $tallies_file
+      fi
+fi
+
+$openmc_xml_validation_dir -i $openmc_project_dir -r  $openmc_relaxng_dir
+
+
+echo "           *********************************************"
+echo "               xml files validation has been finished"
+echo "           *********************************************"
+echo " "
+printf "Press 'CTRL+C' to exit : "
+trap "exit" INT
+while :
+do
+    sleep 10000 
+done
+