TCGAnalyzeR which is an R Shiny based web application enables an integrated analysis of genomic, transcriptomic and clinical data 33 cancer types in TCGA projects; 123 pre-computed pan-cancer cohorts (MSI-H, Immune, PAM50, Triple Negative, IDH1 etc).
Citing the TCGAnalyzeR:
Zengin, Talip, Başak Abak Masud, and Tuğba Önal-Süzek. 2024. "TCGAnalyzeR: An Online Pan-Cancer Tool for Integrative Visualization of Molecular and Clinical Data of Cancer Patients for Cohort and Associated Gene Discovery" Cancers 16, no. 2: 345. https://doi.org/10.3390/cancers16020345