cleanup for relaunch

.Rbuildignore

@@ -17,4 +17,5 @@ hoad.code-workspace
 ^R/.unpaywall_integration\.R$
 .vscode
 .azure
+.radian_history
 ^\.Rproj\.user$

.github/workflows/main.yaml

@@ -9,7 +9,7 @@ jobs:
         shell: Rscript {0}
     container:
       # update muggle here and in Dockerfile
-      image: subugoe/muggle-buildtime-onbuild:0.1.1-20210126
+      image: subugoe/muggle-buildtime-onbuild:0.1.2-20211124
     env:
       MUGGLE_PKG_NAME: ${{ github.event.repository.name }}
       GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
@@ -50,33 +50,6 @@ jobs:
           tags: ${{ github.sha }}
           add_git_labels: true
           push: ${{ github.event_name != 'pull_request' }}
-      - name: Build Runtime Image
-        uses: docker/build-push-action@v1
-        with:
-          repository: ${{ github.repository }}/${{ env.MUGGLE_PKG_NAME }}-runtime
-          target: runtime
-          username: ${{ github.actor }}
-          password: ${{ secrets.GITHUB_TOKEN }}
-          registry: docker.pkg.github.com
-          # this will set "latest" if master as per https://github.com/docker/build-push-action
-          tag_with_ref: true
-          # we're relying on long shas only to keep things easy
-          tag_with_sha: false
-          tags: ${{ github.sha }}
-          add_git_labels: true
-          push: ${{ github.event_name != 'pull_request' }}
-      - name: Deploy Shiny Application to shinyapps.io ref
-        env:
-          SHINYAPPS_TOKEN: ${{ secrets.SHINYAPPS_TOKEN }}
-          SHINYAPPS_SECRET: ${{ secrets.SHINYAPPS_SECRET }}
-          GITHUB_REF: ${{ github.ref }}
-        if: github.event_name != 'pull_request'
-        run: |
-          remotes::install_github(repo = "subugoe/hoad", ref = "master", force = TRUE, dependencies = TRUE)
-          rsconnect::setAccountInfo(name = 'subugoe', token = Sys.getenv('SHINYAPPS_TOKEN'), secret = Sys.getenv('SHINYAPPS_SECRET'))
-          app_name <- paste0("hoad-", gsub("/", "-", Sys.getenv('GITHUB_REF')))
-          rsconnect::deployDoc(doc = "inst/app/dashboard.Rmd", appName = app_name)
-        shell: Rscript {0}
       - name: Deploy to GitHub Pages
         if: github.ref == 'refs/heads/master'
         uses: maxheld83/ghpages@github-token

DESCRIPTION

@@ -49,46 +49,10 @@ Language: en
 LazyData: true
 Roxygen: list(markdown = TRUE)
 Suggests:
-    rmarkdown,
-    jsonlite,
-    ggalt,
-    scales,
-    forcats,
-    cowplot,
-    readxl,
-    flexdashboard,
-    viridis,
-    plotly,
-    shiny,
-    DT,
-    writexl,
-    echarts4r,
-    DBI,
-    dbplyr,
-    haven,
-    lubridate,
-    modelr,
-    reprex,
-    rsconnect,
-    rvest,
-    selectr,
-    httr,
-    purrr,
-    covr,
     testthat,
-    subugoetheme,
-    shinycaas
+    subugoetheme
 URL: https://subugoe.github.io/hoad, https://github.com/subugoe/hoad/
 BugReports: https://github.com/subugoe/hoad/issues
 RoxygenNote: 7.1.1.9999
 Imports:
-    dplyr,
-    checkmate,
-    magrittr,
-    readr,
-    fs,
-    ggplot2,
-    rlang
-Remotes:
-  subugoe/[email protected],
-  subugoe/[email protected]
+    fs

Dockerfile

@@ -1,4 +1,2 @@
-ARG MUGGLE_TAG=0.1.1-20210126
+ARG MUGGLE_TAG=0.1.2-20211124
 FROM subugoe/muggle-buildtime-onbuild:${MUGGLE_TAG} as buildtime
-FROM subugoe/muggle-runtime-onbuild:${MUGGLE_TAG} as runtime
-CMD shinycaas::shiny_opts_az(); hoad::runHOAD()

NAMESPACE

@@ -1,21 +1,2 @@
 # Generated by roxygen2: do not edit by hand
 
-export("%>%")
-export(colors_license)
-export(colors_license_unpaywall)
-export(colors_source_disclosure)
-export(hybrid_publications)
-export(license_patterns)
-export(oa_by_license)
-export(oa_by_license_plot)
-export(oa_by_other)
-export(oa_by_other_plot)
-export(path_extdat)
-export(runHOAD)
-export(unpaywall_df)
-import(checkmate)
-import(dplyr)
-import(ggplot2)
-import(readr)
-importFrom(magrittr,"%>%")
-importFrom(rlang,.data)