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The updates from #42 forces the region view to always have chrom, start, end, tissue, and gene_id, to help preserve and recreate the state of the current view. This leads to a few issues which need to be addressed:
Some of the logic for handling missing data for the region_view() in pheget/frontend/init.py are now obsolete and need to be removed
We need to update the logic for the search box to smartly handle the following searches:
Single-tissue+chromosome: (need to fill in: best gene -> start and end)
Single-gene (gene_id or symbol): (need to fill in: chrom, best tissue, start and end from the gene)
chrom+start+end: (need to fill in: best tissue, best gene -> start and end)
We need to update the searchbox to use the Fetch API to request data from omnisearch instead of the complicated mess it currently uses
The text was updated successfully, but these errors were encountered:
#47 rewrote all requests using the Fetch API, and improved some of the search logic.
We still need to address the case in which the user searches for a single variant (chr:pos or rsnum) which cannot be found in our data. Currently, this kind of search leads to an error. I think the most useful way to handle this is to search for the top signal within a +/- 500kb region, then display the gene x tissue region plot containing that top signal.
The updates from #42 forces the region view to always have chrom, start, end, tissue, and gene_id, to help preserve and recreate the state of the current view. This leads to a few issues which need to be addressed:
Some of the logic for handling missing data for the region_view() in pheget/frontend/init.py are now obsolete and need to be removed
We need to update the logic for the search box to smartly handle the following searches:
The text was updated successfully, but these errors were encountered: