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Provide convenient template for susie import.
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workflows/eqtl/readme.md

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@@ -3,11 +3,21 @@ Process eQTL data into tsv format suitable for import using mongoimport.
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## Importing into mongo
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Data is in format that is suitable to use [mongoimport](https://www.mongodb.com/docs/database-tools/mongoimport/) tool from MongoDB.
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E.g. import consolidated conditional analysis into `eqtl_cond` collection.
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```sh
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mongoimport \
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--host="localhost" --db="bravo-demo" \
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--type="tsv" --columnsHaveTypes --headerline \
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--parseGrace=stop --collection=eqtl_cond \
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--file=result/conditional/all.cond.tsv
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--file=result/all.cond.tsv
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```
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E.g. import consolidated susie analysis into `eqtl_cond` collection.
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```sh
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mongoimport \
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--host="localhost" --db="bravo-demo" \
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--type="tsv" --columnsHaveTypes --headerline \
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--parseGrace=stop --collection=eqtl_susie \
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--file=result/all.susie.tsv
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```

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