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Errors During make #69
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Your specific compiler version has a bug for the regex library. Try anything more recent among gcc compilers. |
Thank you. I was able to compile using gcc 9.3.0. However, when I try to run it, I get an error with glibcxx: preseq -h |
That's due to a mismatch in the environment likely caused by an incomplete installation or configuration of the new compiler. Are you administering your system? If so, I can probably give pointers. If not, you'd have to take it up with your admin. |
Yes, I am the admin. We have an HPC cluster and I configured preseq as an R module which calls the binary. We can normally configure binaries this way. |
In that case I suggest fully removing all c compilers you are able to, and then reinstalling the one you are using (should be gcc 5.3 or later I think; I use 13 currently). This is the simplest |
thanks, I added module load gcc/9.3.0 in the R tcl file and it works fine now. You can close this. |
Great! Thanks for the tip @stooz5 |
Hello,
I am trying to run a make and am getting errors regarding regex (errors attached). Could you please review and let me know what could be the issue?
Thank you.
preseq.txt
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