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1. smithlabcode/preseq smithlabcode/preseq Public

   Software for predicting library complexity and genome coverage in high-throughput sequencing.

   C++ 78 16

2. smithlabcode/falco smithlabcode/falco Public

   A C++ drop-in replacement of FastQC to assess the quality of sequence read data

   HTML 98 11

3. smithlabcode/ribotricer smithlabcode/ribotricer Public

   A tool for accurately detecting actively translating ORFs from Ribo-seq data

   Python 35 8

4. smithlabcode/riborex smithlabcode/riborex Public

   Riborex: Fast and flexible identification of differential translation from Ribo-seq data

   R 10 2

5. smithlabcode/abismal smithlabcode/abismal Public

   Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.

   C++ 12 5

6. smithlabcode/dnmtools smithlabcode/dnmtools Public

   Tools for analyzing DNA methylation data

   C++ 29 9