This repository includes examples showing how to configure Nextflow to run with the Wave container provisioning service.
- Authenticate private container repositories
- Build and deliver Nextflow module containers
- Build and deliver module containers to a private repository
- Build a container based on Conda packages
- Augment existing containers with Nextflow process resources
- Run a pipeline with S3 using Wave and Fusion file system
- Run nf-core/RNAseq using Conda-based containers and Fusion file system
- Run a pipeline on a remote Kubernetes cluster using Wave and Fusion file system
- Run a pipeline with Google Batch using Fusion over Google Storage bucket
- Run a pipeline with Google Kubernetes Engine using Fusion over Google Storage bucket
- Bonus: Interactive debugging of remotely executed tasks
For more details check out the Wave user documentation.