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Assert bundle tractograms and data in bundling script according to the set of expected bundles:

  • Make sure that all config files involved contain all the bundles existing in the anatomy file.
  • Filter any other tractogram file in the atlas folder.

Add the necessary helper methods and definitions.

Add the corresponding tests.

Fixes #57.

Assert bundle tractograms and data in bundling script according to the
set of expected bundles:
- Make sure that all config files involved contain all the bundles
  existing in the anatomy file.
- Filter any other tractogram file in the atlas folder.

Add the necessary helper methods and definitions.

Add the corresponding tests.
@github-actions github-actions bot added area:io Items affecting the io module type:testing Guarantee that the code is working/ensure that the results match the expected ones type:enhancement New feature or request labels May 6, 2023
@jhlegarreta
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inform the user about the presence of other files in the atlas folder that do not correspond to the bundle names in the anatomy config files

I chose not to inform the user about it; I think it is enough with filtering the files that are not relevant; by providing a config, it is understood that the user is aware of the target bundles.

@jhlegarreta
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jhlegarreta commented May 6, 2023

Package testing failures are unrelated; PR #59 was opened to try to address them, but it looks like the dependency solver is unable to find a solution for pandas. Needs to be investigated, but the current PR is good as it is.

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stale bot commented Apr 26, 2025

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs, but you will still be able to re-open it. Thank you for your contributions.

@stale stale bot added the wontfix label Apr 26, 2025
@stale stale bot closed this Jul 19, 2025
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area:io Items affecting the io module type:enhancement New feature or request type:testing Guarantee that the code is working/ensure that the results match the expected ones wontfix

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Filter target tractograms depending on the provided anatomy file

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