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update to use htsFile in synced reader (for #1862) Windows/MinGW-W64 CI #133: Pull request #1868 opened by vasudeva8
December 23, 2024 15:54 4m 39s vasudeva8:bcfsr
vasudeva8:bcfsr
December 23, 2024 15:54 4m 39s
update to work with vcf 4.4 prefixed phasing info Windows/MinGW-W64 CI #132: Pull request #1861 synchronize by vasudeva8
December 18, 2024 18:24 4m 40s vasudeva8:vcf44GT
vasudeva8:vcf44GT
December 18, 2024 18:24 4m 40s
Fix cram_encode fuzzer issue caused by negative reference lengths. Windows/MinGW-W64 CI #131: Commit c705bec pushed by daviesrob
December 11, 2024 09:44 4m 55s develop
develop
December 11, 2024 09:44 4m 55s
update to work with vcf 4.4 prefixed phasing info Windows/MinGW-W64 CI #130: Pull request #1861 synchronize by vasudeva8
December 9, 2024 11:35 5m 2s vasudeva8:vcf44GT
vasudeva8:vcf44GT
December 9, 2024 11:35 5m 2s
Fix cram_encode fuzzer issue caused by negative reference lengths. Windows/MinGW-W64 CI #129: Pull request #1863 opened by jkbonfield
December 9, 2024 09:42 4m 59s jkbonfield:fuzz_382922241
jkbonfield:fuzz_382922241
December 9, 2024 09:42 4m 59s
update to work with vcf 4.4 prefixed phasing info Windows/MinGW-W64 CI #128: Pull request #1861 synchronize by vasudeva8
December 6, 2024 19:12 2m 14s vasudeva8:vcf44GT
vasudeva8:vcf44GT
December 6, 2024 19:12 2m 14s
update to work with vcf 4.4 prefixed phasing info Windows/MinGW-W64 CI #127: Pull request #1861 synchronize by vasudeva8
December 5, 2024 11:53 5m 25s vasudeva8:vcf44GT
vasudeva8:vcf44GT
December 5, 2024 11:53 5m 25s
update to work with vcf 4.4 prefixed phasing info Windows/MinGW-W64 CI #126: Pull request #1861 synchronize by vasudeva8
November 26, 2024 18:02 4m 52s vasudeva8:vcf44GT
vasudeva8:vcf44GT
November 26, 2024 18:02 4m 52s
update to work with vcf 4.4 prefixed phasing info Windows/MinGW-W64 CI #125: Pull request #1861 opened by vasudeva8
November 26, 2024 17:50 4m 42s vasudeva8:vcf44GT
vasudeva8:vcf44GT
November 26, 2024 17:50 4m 42s
Fix a bug in breakend detection Windows/MinGW-W64 CI #124: Commit a662866 pushed by daviesrob
November 19, 2024 17:48 4m 55s develop
develop
November 19, 2024 17:48 4m 55s
sam_internal.h: code2base[512 -> 513] because the byte for end-of-string is missing. Windows/MinGW-W64 CI #123: Pull request #1859 opened by lindenb
November 19, 2024 13:21 6m 26s lindenb:pl_code2base513
lindenb:pl_code2base513
November 19, 2024 13:21 6m 26s
Fix threaded sam_read1 after EOF. Windows/MinGW-W64 CI #122: Commit c384c81 pushed by whitwham
November 19, 2024 10:30 4m 50s develop
develop
November 19, 2024 10:30 4m 50s
Make use of posix_memalign for hfile buffer. Windows/MinGW-W64 CI #121: Commit 0fdba48 pushed by daviesrob
November 18, 2024 09:43 5m 9s develop
develop
November 18, 2024 09:43 5m 9s
Increase the input block size for bgzip. Windows/MinGW-W64 CI #120: Pull request #1768 synchronize by jkbonfield
November 18, 2024 09:26 5m 38s jkbonfield:bgzip_blk_size
jkbonfield:bgzip_blk_size
November 18, 2024 09:26 5m 38s
Fix a bug in breakend detection Windows/MinGW-W64 CI #119: Pull request #1858 opened by pd3
November 17, 2024 19:32 4m 49s pd3:bt-2317-bnd
pd3:bt-2317-bnd
November 17, 2024 19:32 4m 49s
Increase the input block size for bgzip. Windows/MinGW-W64 CI #118: Pull request #1768 synchronize by jkbonfield
November 14, 2024 12:41 4m 58s jkbonfield:bgzip_blk_size
jkbonfield:bgzip_blk_size
November 14, 2024 12:41 4m 58s
Add an hts_crc32 function to use zlib or libdeflate. (#1850) Windows/MinGW-W64 CI #116: Commit 1d2e493 pushed by vasudeva8
October 31, 2024 17:31 4m 38s develop
develop
October 31, 2024 17:31 4m 38s
Add an hts_crc32 function to use zlib or libdeflate. Windows/MinGW-W64 CI #115: Pull request #1850 synchronize by jkbonfield
October 31, 2024 17:02 4m 34s jkbonfield:hts_crc32
jkbonfield:hts_crc32
October 31, 2024 17:02 4m 34s
Increase the input block size for bgzip. Windows/MinGW-W64 CI #114: Pull request #1768 synchronize by jkbonfield
October 31, 2024 16:51 4m 42s jkbonfield:bgzip_blk_size
jkbonfield:bgzip_blk_size
October 31, 2024 16:51 4m 42s
Fix threaded sam_read1 after EOF. Windows/MinGW-W64 CI #113: Pull request #1856 opened by jkbonfield
October 31, 2024 15:31 4m 51s jkbonfield:fix_1855
jkbonfield:fix_1855
October 31, 2024 15:31 4m 51s
Increase the input block size for bgzip. Windows/MinGW-W64 CI #112: Pull request #1768 synchronize by jkbonfield
October 30, 2024 09:33 4m 33s jkbonfield:bgzip_blk_size
jkbonfield:bgzip_blk_size
October 30, 2024 09:33 4m 33s
BUGFIX header.c sam_hdr_remove_line_pos() Windows/MinGW-W64 CI #111: Commit cf0e756 pushed by jkbonfield
October 29, 2024 12:25 4m 44s develop
develop
October 29, 2024 12:25 4m 44s
Remove -lhts from Libs.private in the pkg-config file. Windows/MinGW-W64 CI #110: Commit d43c5f6 pushed by daviesrob
October 28, 2024 11:43 4m 37s develop
develop
October 28, 2024 11:43 4m 37s
Convert U to T instead of U to N when sam_parsing. Windows/MinGW-W64 CI #109: Commit 7f3b758 pushed by whitwham
October 25, 2024 13:48 4m 44s develop
develop
October 25, 2024 13:48 4m 44s
Convert U to T instead of U to N when sam_parsing. Windows/MinGW-W64 CI #108: Pull request #1854 opened by jkbonfield
October 24, 2024 10:01 4m 43s jkbonfield:UtoT
jkbonfield:UtoT
October 24, 2024 10:01 4m 43s