Need to explicitly link correct openblas lib in nvconf

Note that this path differs in Debian vs Ubuntu-based images

ubuntu/10.0/Dockerfile

@@ -22,20 +22,20 @@ RUN  . /tmp/install_R.sh
 
 
 COPY install_rstudio.sh /tmp/install_rstudio.sh
-RUN . /tmp/install_rstudio.sh
+#RUN . /tmp/install_rstudio.sh
 COPY userconf.sh /etc/cont-init.d/userconf
 EXPOSE 8787
-CMD ["/init"]
+#CMD ["/init"]
 
 
 
 COPY install_tidyverse.sh /tmp/install_tidyverse.sh
-RUN . /tmp/install_tidyverse.sh
+#RUN . /tmp/install_tidyverse.sh
 
 
 
 COPY install_verse.sh /tmp/install_verse.sh
-RUN . /tmp/install_verse.sh
+#RUN . /tmp/install_verse.sh
 
 
 
@@ -57,5 +57,5 @@ RUN . /tmp/install_python.sh
 
 
 COPY install_tensorflow-gpu.sh /tmp/install_tensorflow-gpu.sh
-RUN . /tmp/install_tensorflow-gpu.sh
+#RUN . /tmp/install_tensorflow-gpu.sh
 

ubuntu/10.0/config_R_cuda.sh

@@ -8,13 +8,18 @@ set -e
 ## (From https://tensorflow.rstudio.com/tools/local_gpu.html#environment-variables)
 echo "\n\
       \nCUDA_HOME=$CUDA_HOME\
-      \nPATH=$PATH" >> ${R_HOME}/etc/Renviron && \
+      \nPATH=$PATH" >> ${R_HOME}/etc/Renviron 
+
+if test -f /etc/rstudio/rserver.conf; then 
   echo "rsession-ld-library-path=$LD_LIBRARY_PATH" >> /etc/rstudio/rserver.conf
+fi
+
+touch /var/log/nvblas.log && chown :staff /var/log/nvblas.log
 
 ## Configure R & RStudio to use drop-in CUDA blas
 ## Allow R to use CUDA for BLAS, with fallback on openblas
 echo "\nNVBLAS_LOGFILE /var/log/nvblas.log \
-      \nNVBLAS_CPU_BLAS_LIB /usr/lib/libopenblas.so \
+      \nNVBLAS_CPU_BLAS_LIB /usr/lib/x86_64-linux-gnu/openblas/libblas.so.3 \
       \nNVBLAS_GPU_LIST ALL" > /etc/nvblas.conf
 
 echo "NVBLAS_CONFIG_FILE=$NVBLAS_CONFIG_FILE" >> ${R_HOME}/etc/Renviron

ubuntu/10.0/install_python.sh

@@ -16,5 +16,5 @@ echo "\nRETICULATE_PYTHON_ENV=${RETICULATE_PYTHON_ENV}" >> ${R_HOME}/etc/Renviro
 ln -s ${PYTHON_VENV_PATH}/bin/pip /usr/local/bin/pip
 ln -s ${PYTHON_VENV_PATH}/bin/virtualenv /usr/local/bin/virtualenv
 
-chown -R rstudio:rstudio ${PYTHON_VENV_PATH}
+chown :staff ${PYTHON_VENV_PATH}