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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,19 @@ | ||
| #' | ||
| #' Exhibit features of a dataset by printing them to the R console | ||
| #' @name exhibit-TTUProject | ||
| #' @description exhibit method applied to TTUProject | ||
| #' @param x An object of class TTUProject | ||
| #' @param what_1L_chr What (a character vector of length one), Default: 'predictors' | ||
| #' @param ... Additional arguments | ||
| #' @return NULL | ||
| #' @rdname exhibit-methods | ||
| #' @aliases exhibit,TTUProject-method | ||
| #' @export | ||
| #' @importFrom ready4 exhibit | ||
| methods::setMethod("exhibit", "TTUProject", function (x, what_1L_chr = "predictors", ...) | ||
| { | ||
| if (what_1L_chr == "predictors") { | ||
| exhibitSlot(x, "b_SpecificParameters@predictors_lup", | ||
| ... = ...) | ||
| } | ||
| }) |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,69 @@ | ||
| #' | ||
| #' Investigate solutions to an inverse problem | ||
| #' @name investigate-TTUProject | ||
| #' @description investigate method applied to TTUProject | ||
| #' @param x An object of class TTUProject | ||
| #' @param backend_1L_chr Backend (a character vector of length one), Default: 'cmdstanr' | ||
| #' @param combinations_1L_lgl Combinations (a logical vector of length one), Default: F | ||
| #' @param consent_1L_chr Consent (a character vector of length one), Default: '' | ||
| #' @param cores_1L_int Cores (an integer vector of length one), Default: 1 | ||
| #' @param depnt_var_max_val_1L_dbl Dependent variable maximum value (a double vector of length one), Default: numeric(0) | ||
| #' @param depnt_var_min_val_1L_dbl Dependent variable minimum value (a double vector of length one), Default: numeric(0) | ||
| #' @param existing_predrs_ls Existing predictors (a list), Default: NULL | ||
| #' @param max_nbr_of_covars_1L_int Maximum number of covariates (an integer vector of length one), Default: integer(0) | ||
| #' @param new_dir_nm_1L_chr New directory name (a character vector of length one), Default: 'F_TS_Mdls' | ||
| #' @param scndry_anlys_params_ls Secondary analysis parameters (a list), Default: NULL | ||
| #' @param session_ls Session (a list), Default: NULL | ||
| #' @param signft_covars_cdn_1L_chr Significant covariates condition (a character vector of length one), Default: 'any' | ||
| #' @param ... Additional arguments | ||
| #' @return x (An object of class TTUProject) | ||
| #' @rdname investigate-methods | ||
| #' @aliases investigate,TTUProject-method | ||
| #' @export | ||
| #' @importFrom rlang exec | ||
| #' @importFrom ready4 investigate | ||
| methods::setMethod("investigate", "TTUProject", function (x, backend_1L_chr = "cmdstanr", combinations_1L_lgl = F, | ||
| consent_1L_chr = "", cores_1L_int = 1L, depnt_var_max_val_1L_dbl = numeric(0), | ||
| depnt_var_min_val_1L_dbl = numeric(0), existing_predrs_ls = NULL, | ||
| max_nbr_of_covars_1L_int = integer(0), new_dir_nm_1L_chr = "F_TS_Mdls", | ||
| scndry_anlys_params_ls = NULL, session_ls = NULL, signft_covars_cdn_1L_chr = "any", | ||
| ...) | ||
| { | ||
| args_ls <- list(...) | ||
| args_ls <- append(list(slot_nm_1L_chr = "c_SpecificProject", | ||
| consent_1L_chr = consent_1L_chr), args_ls) | ||
| if (inherits(x@c_SpecificProject, what = "SpecificModels") & | ||
| !(inherits(x@c_SpecificProject, what = "SpecificFixed") | | ||
| inherits(x@c_SpecificProject, what = "SpecificMixed") | | ||
| inherits(x@c_SpecificProject, what = "SpecificPredictors"))) { | ||
| args_ls <- append(list(depnt_var_max_val_1L_dbl = ifelse(identical(depnt_var_max_val_1L_dbl, | ||
| numeric(0)), 1, depnt_var_max_val_1L_dbl), depnt_var_min_val_1L_dbl = ifelse(identical(depnt_var_max_val_1L_dbl, | ||
| numeric(0)), -1, depnt_var_max_val_1L_dbl), session_ls = session_ls), | ||
| args_ls) | ||
| } | ||
| if (inherits(x@c_SpecificProject, what = "SpecificPredictors") & | ||
| !(inherits(x@c_SpecificProject, what = "SpecificFixed") | | ||
| inherits(x@c_SpecificProject, what = "SpecificMixed"))) { | ||
| args_ls <- append(list(depnt_var_min_val_1L_dbl = depnt_var_min_val_1L_dbl, | ||
| signft_covars_cdn_1L_chr = signft_covars_cdn_1L_chr), | ||
| args_ls) | ||
| } | ||
| if (inherits(x@c_SpecificProject, what = "SpecificFixed") & | ||
| !(inherits(x@c_SpecificProject, what = "SpecificMixed"))) { | ||
| args_ls <- append(list(combinations_1L_lgl = combinations_1L_lgl, | ||
| depnt_var_min_val_1L_dbl = depnt_var_min_val_1L_dbl, | ||
| existing_predrs_ls = existing_predrs_ls, max_nbr_of_covars_1L_int = max_nbr_of_covars_1L_int), | ||
| args_ls) | ||
| } | ||
| if (inherits(x@c_SpecificProject, what = "SpecificMixed")) { | ||
| args_ls <- append(list(backend_1L_chr = backend_1L_chr, | ||
| combinations_1L_lgl = combinations_1L_lgl, cores_1L_int = cores_1L_int, | ||
| depnt_var_min_val_1L_dbl = depnt_var_min_val_1L_dbl, | ||
| existing_predrs_ls = existing_predrs_ls, max_nbr_of_covars_1L_int = max_nbr_of_covars_1L_int, | ||
| new_dir_nm_1L_chr = new_dir_nm_1L_chr, scndry_anlys_params_ls = scndry_anlys_params_ls), | ||
| args_ls) | ||
| } | ||
| new_val_xx <- rlang::exec(investigateSlot, x, !!!args_ls) | ||
| x <- renewSlot(x, "c_SpecificProject", new_val_xx) | ||
| return(x) | ||
| }) |
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