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IGoR v1.3.0

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@qmarcou qmarcou released this 04 Aug 19:40
· 50 commits to master since this release

New features:

  • Add ---best_gene_only boolean for alignments
  • Allow for template specific alignment offsets
  • Allow for reversed offsets use via command line
  • Pygor package installable via pip (by @penuts7644)
  • New documentation website available at: https://qmarcou.github.io/IGoR/

Bug fixes:

  • Fix autogen creation of man and html README
  • Fix semi colon separated files for gene anchors (human BCR, mice TRB)
  • Fix pygor package broken imports and functions (by @penuts7644)
  • Fix IGoR directory creation and installation problems (by @smoe)
  • Fix bug on number of scenarios for the scenario counter CL
  • Fix alignment threshold for --ntCDR3 sequences

Miscellaneous :

  • Split documentation in several files.
  • Create a proper manpage.
  • Improve error handling for alignment issues (report faulty genomic template)
  • Improve error handling for some input files reading
  • make the autogen.sh and build_release scripts executable (by @NickEngland)
  • Clean and make the Pygor package PEP8 compliant (by @penuts7644)